RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 C20orf27Q9GZN8 174 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 CCDC90BQ9GZT6 254 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 C6orf62Q9GZU0 229 aaPredicted RBP0.13□□□□□ -2.39
SYCP3-205ENST00000478238 UCK1Q9HA47 277 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 C14orf105Q9NVL8 296 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 NHP2Q9NX24 153 aaKnown RBP0.13□□□□□ -2.39
SYCP3-205ENST00000478238 TAS2R7Q9NYW3 318 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 NEO1Q92859 1461 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
SYCP3-205ENST00000478238 UBR2Q8IWV8 1755 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 DOCK4Q8N1I0 1966 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 FAT4Q6V0I7 4981 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 FRAS1Q86XX4 4008 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 PTPRDP23468 1912 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 MYLKQ15746 1914 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 NUP98P52948 1817 aa0.13□□□□□ -2.39
SYCP3-205ENST00000478238 N4BP2Q86UW6 1770 aaPredicted RBP0.12□□□□□ -2.39
SYCP3-205ENST00000478238 UNC13CQ8NB66 2214 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 hCG_1818297A0A087WSY0 165 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 A0A087WUJ7 227 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 A0A087X0T9 212 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 hADV38S2A0JD32 116 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 A8MT66 165 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 CCL16O15467 120 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 CYB5BO43169 146 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 GADD45GO95257 159 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 ZNF682O95780 498 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 SERPINA6P08185 405 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 RPS17P08708 135 aaKnown RBP0.12□□□□□ -2.39
SYCP3-205ENST00000478238 SRIP30626 198 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 YPEL3P61236 119 aaPredicted RBP0.12□□□□□ -2.39
SYCP3-205ENST00000478238 RHOBP62745 196 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 DYNLT1P63172 113 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 PSG9Q00887 426 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 TSNQ15631 228 aaKnown RBP0.12□□□□□ -2.39
SYCP3-205ENST00000478238 IMPG1Q17R60 797 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 C12orf74Q32Q52 190 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 TRAPPC5Q8IUR0 188 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 C12orf45Q8N5I9 185 aaPredicted RBP0.12□□□□□ -2.39
SYCP3-205ENST00000478238 GDPD1Q8N9F7 314 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 CT55Q8WUE5 264 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 SLAMF6Q96DU3 332 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 TLNRD1Q9H1K6 362 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 BCL2L10Q9HD36 194 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 UQCC1Q9NVA1 299 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 FBXO5Q9UKT4 447 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 PRELID3BQ9Y3B1 194 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 MGAMO43451 1857 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 MYO3BQ8WXR4 1341 aa0.12□□□□□ -2.39
SYCP3-205ENST00000478238 ADCY9O60503 1353 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 TRBV6-4A0A1B0GX49 114 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 TCRBV4S1A1TA0A5B7 111 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 C7orf71A4D174 169 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 SMIM9A6NGZ8 99 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 OR2T8A6NH00 312 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 SERPINE1P05121 402 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 CD2P06729 351 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 PPIBP23284 216 aaKnown RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 RNASE4P34096 147 aaKnown RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 ANP32AP39687 249 aaKnown RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 OMPP47874 163 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 RANP62826 216 aaKnown RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 AESQ08117 197 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 ITGB3BPQ13352 177 aaPredicted RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 LINC00322Q6ZN03 302 aaPredicted RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 LCA10Q71F78 164 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 Q8IYB0 196 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 ST6GALNAC3Q8NDV1 305 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 SLC30A7Q8NEW0 376 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 OR52L1Q8NGH7 329 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 OR2T35Q8NGX2 323 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 OR2T10Q8NGZ9 312 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 TMEM254Q8TBM7 123 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 STAG3L4Q8TBR4 150 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 TEX47Q8TBZ9 253 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 BORCS7Q96B45 105 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 CMSS1Q9BQ75 279 aaKnown RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 PRADC1Q9BSG0 188 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 C14orf132Q9NPU4 83 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 TMEM14CQ9P0S9 112 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 CHCHD2Q9Y6H1 151 aaPredicted RBP0.11□□□□□ -2.39
SYCP3-205ENST00000478238 PIK3C2GO75747 1445 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 ZFYVE9O95405 1425 aa0.11□□□□□ -2.39
SYCP3-205ENST00000478238 ZGRF1Q86YA3 2104 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TET1Q8NFU7 2136 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 LOC285556D6RIA3 1793 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 IGHV1-58A0A0C4DH39 117 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TLCD2A6NGC4 264 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 B4DSR2 109 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 KPNA3O00505 521 aaPredicted RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 PDE6DO43924 150 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TIMM17BO60830 172 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 NIPSNAP2O75323 286 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 RPP14O95059 124 aaKnown RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 DHFRP00374 187 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TCRBP04435 133 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 C8GP07360 202 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 SRP14P37108 136 aaKnown RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 SERPINB9P50453 376 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms