RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 C17orf50Q8WW18 174 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 FAM167A-AS1Q96KT0 104 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 FANCD2OSQ96PS1 177 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 OR5B12Q96R08 314 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 PAXXQ9BUH6 204 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 ZNF355PQ9NSJ1 428 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 MLXQ9UH92 298 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 HIGD1AQ9Y241 93 aa6.27□□□□□ -1.41
VMA21-203ENST00000477649 TNCP24821 2201 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 TRAV40A0A0B4J280 105 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 C1orf196B1AJZ1 125 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 H7BYZ3 331 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 GNG7O60262 68 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 NDUFB4O95168 129 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 RAB5AP20339 215 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 COL8A1P27658 744 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 TAS2R60P59551 318 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 UBE2G2P60604 165 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 RPL23P62829 140 aaKnown RBP6.26□□□□□ -1.41
VMA21-203ENST00000477649 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
VMA21-203ENST00000477649 ADIRFQ15847 76 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 ZNF674Q2M3X9 581 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 DEFB113Q30KQ7 82 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 FAM209BQ5JX69 171 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 PATE2Q6UY27 113 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 C1QL4Q86Z23 238 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 NECAP1Q8NC96 275 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 OR1B1Q8NGR6 318 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 SMIM12Q96EX1 92 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 C20orf24Q9BUV8 137 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 SLC25A2Q9BXI2 301 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 HIF1ANQ9NWT6 349 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 C21orf62Q9NYP8 219 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 MRPL36Q9P0J6 103 aaKnown RBP6.26□□□□□ -1.41
VMA21-203ENST00000477649 YTHDF2Q9Y5A9 579 aaKnown RBP6.26□□□□□ -1.41
VMA21-203ENST00000477649 DMRT1Q9Y5R6 373 aa6.26□□□□□ -1.41
VMA21-203ENST00000477649 PTPN13Q12923 2485 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 TRBV24-1A0A075B6N3 115 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 TRBV7-1A0A0A6YYK4 115 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 TRBV9A0A0B4J1U6 114 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 FAM223BA6NKX1 122 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 J3QKU1 62 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 NDUFB8O95169 186 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 IGKV1-17P01599 117 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 HIST1H1EP10412 219 aaKnown RBP6.25□□□□□ -1.41
VMA21-203ENST00000477649 EGR2P11161 476 aaPredicted RBP6.25□□□□□ -1.41
VMA21-203ENST00000477649 PSG1P11464 419 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 ORM2P19652 201 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
VMA21-203ENST00000477649 CD24P25063 80 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 SRP14P37108 136 aaKnown RBP6.25□□□□□ -1.41
VMA21-203ENST00000477649 ATP5G3P48201 142 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 ASPHD1Q5U4P2 390 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 KCNIP4Q6PIL6 250 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 UNQ5815/PRO19632Q6UWF5 114 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 LINC01551Q86U37 167 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 FAM223AQ8IWN6 122 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 ARL6IP6Q8N6S5 226 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 OR5R1Q8NH85 324 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 ZNF503Q96F45 646 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 YPEL4Q96NS1 127 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 BIN3Q9NQY0 253 aa6.25□□□□□ -1.41
VMA21-203ENST00000477649 MRPL27Q9P0M9 148 aaKnown RBP6.25□□□□□ -1.41
VMA21-203ENST00000477649 A0A096LNT2 108 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 WI2-2373I1.2A0A1W2PRP0 233 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 A6NDX4 124 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 HELTA6NFD8 242 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 IGF1P05019 195 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 CRYBA1P05813 215 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 NBEAP1P0C6P0 100 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 APELAP0DMC3 54 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 NPPCP23582 126 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 CNN1P51911 297 aaKnown RBP6.24□□□□□ -1.41
VMA21-203ENST00000477649 NDPQ00604 133 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 PDE6HQ13956 83 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 TIGITQ495A1 244 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 Q56UQ5 140 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 FAM120AOSQ5T036 256 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 ZNF343Q6P1L6 599 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 C9orf139Q6ZV77 190 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 BPIFA4PQ86YQ2 179 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 EEF1AKMT3Q96AZ1 226 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 FXYD5Q96DB9 178 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 RNF125Q96EQ8 232 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 FAM103A1Q9BTL3 118 aaKnown RBP6.24□□□□□ -1.41
VMA21-203ENST00000477649 CHRDL1Q9BU40 450 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 SLC25A39Q9BZJ4 359 aaPredicted RBP6.24□□□□□ -1.41
VMA21-203ENST00000477649 FBXL7Q9UJT9 491 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 CDC42EP3Q9UKI2 254 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 FLNCQ14315 2725 aa6.24□□□□□ -1.41
VMA21-203ENST00000477649 UBR5O95071 2799 aaPredicted RBP6.23□□□□□ -1.41
VMA21-203ENST00000477649 UTP20O75691 2785 aaKnown RBP6.23□□□□□ -1.41
VMA21-203ENST00000477649 TEX15Q9BXT5 2789 aa6.23□□□□□ -1.41
VMA21-203ENST00000477649 A0A0U1RQK1 487 aa6.23□□□□□ -1.41
VMA21-203ENST00000477649 MDFIC2A0A1B0GVS7 189 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms