RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SLC38A11Q08AI6 406 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 CLINT1Q14677 625 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-221ENST00000477561 FAM106AQ4KMX7 169 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 C2orf83Q53S99 150 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 FAM209BQ5JX69 171 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 RPL7L1Q6DKI1 246 aaKnown RBP6.27□□□□□ -1.41
HDAC6-221ENST00000477561 OR8G2PQ6IF36 304 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 GPHB5Q86YW7 130 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 SBSPONQ8IVN8 264 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 ZNF502Q8TBZ5 544 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 LRRC20Q8TCA0 184 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 DYNLRB2Q8TF09 96 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 CXorf58Q96LI9 332 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 GGACTQ9BVM4 153 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 SIGLEC8Q9NYZ4 499 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 THYN1Q9P016 225 aa6.27□□□□□ -1.41
HDAC6-221ENST00000477561 F11RQ9Y624 299 aaKnown RBP6.27□□□□□ -1.41
HDAC6-221ENST00000477561 OR2T8A6NH00 312 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 CYB5BO43169 146 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 CFDP00746 253 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-221ENST00000477561 NHLRC4P0CG21 123 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-221ENST00000477561 IGHV4-30-4P0DP06 118 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 GUCA2BQ16661 112 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 DEFB114Q30KQ6 69 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 TM4SF20Q53R12 229 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 LCN12Q6JVE5 192 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 UNQ9165/PRO28630Q6UXU0 137 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 OR1L6Q8NGR2 347 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 VN1R17PQ8TDU5 208 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 GNPNAT1Q96EK6 184 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-221ENST00000477561 MISP3Q96FF7 219 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 BSCL2Q96G97 398 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-221ENST00000477561 GINS3Q9BRX5 216 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 PARD6GQ9BYG4 376 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-221ENST00000477561 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 SLC25A32Q9H2D1 315 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 WFDC1Q9HC57 220 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 UQCC1Q9NVA1 299 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 U3KQK5 164 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 SORL1Q92673 2214 aa6.26□□□□□ -1.41
HDAC6-221ENST00000477561 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 TMEM213A2RRL7 107 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 PMS2P5A8MQ11 134 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 FNDC10F2Z333 226 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 K7EIM0 57 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 LGALS9O00182 355 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 CORTO00230 105 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 TGOLN2O43493 480 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 IGHV3-48P01763 117 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 SEC11BP0C7V7 166 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 RNASE2P10153 161 aaKnown RBP6.25□□□□□ -1.41
HDAC6-221ENST00000477561 CBLN1P23435 193 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 DLK1P80370 383 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 NDUFA5Q16718 116 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 VWC2Q2TAL6 325 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 BSXQ3C1V8 233 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 Q56UQ5 140 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 ALKAL2Q6UX46 152 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 ZNF114Q8NC26 417 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 RNASEH2CQ8TDP1 164 aaKnown RBP6.25□□□□□ -1.41
HDAC6-221ENST00000477561 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 CHRDL1Q9BU40 450 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 C21orf62Q9NYP8 219 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 MLXQ9UH92 298 aa6.25□□□□□ -1.41
HDAC6-221ENST00000477561 UBE2L5PA0A1B0GUS4 154 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 RPS10-NUDT3A0A1W2PQS6 291 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 ZNF785A8K8V0 405 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 C17orf112F2Z3M2 114 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 F8W735 103 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-221ENST00000477561 ZNF207O43670 478 aaKnown RBP6.24□□□□□ -1.41
HDAC6-221ENST00000477561 MPDU1O75352 247 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 CD7P09564 240 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 SPP1P10451 314 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 GPX4P36969 197 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-221ENST00000477561 RAB5CP51148 216 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 CD81P60033 236 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 CLLU1Q5K131 121 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 ETFRF1Q6IPR1 90 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 BTNL8Q6UX41 500 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 GTSCR1Q86UQ5 136 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 HSD17B11Q8NBQ5 300 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 OR2K2Q8NGT1 345 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 OR1P1Q8NH06 330 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 TMED6Q8WW62 240 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 PSMG3Q9BT73 122 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-221ENST00000477561 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
HDAC6-221ENST00000477561 TUBA4BQ9H853 241 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 C19orf73Q9NVV2 129 aa6.24□□□□□ -1.41
HDAC6-221ENST00000477561 SMCO3A2RU48 225 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 A8MWP6 167 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 UMAD1C9J7I0 102 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 PRSS46E5RG02 174 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 I3L2K1 104 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 MT-CO2P00403 227 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 FGF7P21781 194 aa6.23□□□□□ -1.41
HDAC6-221ENST00000477561 ATP6V0CP27449 155 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms