RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 CRIP2P52943 208 aaPredicted RBP5.28□□□□□ -1.56
LDB3-206ENST00000477489 YPEL3P61236 119 aaPredicted RBP5.28□□□□□ -1.56
LDB3-206ENST00000477489 GNB1P62873 340 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 CX3CL1P78423 397 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 LOXL1Q08397 574 aaPredicted RBP5.28□□□□□ -1.56
LDB3-206ENST00000477489 TMEM241Q24JQ0 296 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 CLEC12BQ2HXU8 276 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 Q8N9W7 124 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 LINC01356Q8N9X3 169 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 OR4F5Q8NH21 305 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 OR2T6Q8NHC8 308 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 SGMS2Q8NHU3 365 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 VN1R17PQ8TDU5 208 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 NPIPB3Q92617 1050 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 ANAPC16Q96DE5 110 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 AJUBAQ96IF1 538 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 OR4F4Q96R69 305 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 SMIM7Q9BQ49 75 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 WNT10AQ9GZT5 417 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 SEPSECSQ9HD40 501 aaKnown RBP5.28□□□□□ -1.56
LDB3-206ENST00000477489 RPS10P5Q9NQ39 176 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 PITPNC1Q9UKF7 332 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
LDB3-206ENST00000477489 ARHGAP32A7KAX9 2087 aa5.28□□□□□ -1.56
LDB3-206ENST00000477489 IGHV4-30-2A0A087WSY4 118 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 FAM74A7A6NL05 159 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 NCBP2LA6PVI3 153 aaKnown RBP5.27□□□□□ -1.57
LDB3-206ENST00000477489 FCN1O00602 326 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 PPP1R2P9O14990 202 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 HYPMO75409 117 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 MFAP2P55001 183 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 MFAP4P55083 255 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 DLX1P56177 255 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 AKIRIN2Q53H80 203 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 GCSAMLQ5JQS6 135 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 FAM209BQ5JX69 171 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.27□□□□□ -1.57
LDB3-206ENST00000477489 DYNAPQ8N1N2 210 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 OR51G1Q8NGK1 321 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 FAM110DQ8TAY7 271 aaPredicted RBP5.27□□□□□ -1.57
LDB3-206ENST00000477489 SMIM12Q96EX1 92 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 RBM14Q96PK6 669 aaKnown RBP5.27□□□□□ -1.57
LDB3-206ENST00000477489 PARLQ9H300 379 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 TMEM14CQ9P0S9 112 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 MOB4Q9Y3A3 225 aa5.27□□□□□ -1.57
LDB3-206ENST00000477489 PUS1Q9Y606 427 aaKnown RBP eCLIP5.27□□□□□ -1.57
LDB3-206ENST00000477489 HRNRQ86YZ3 2850 aaPredicted RBP5.26□□□□□ -1.57
LDB3-206ENST00000477489 PLXNB1O43157 2135 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 A0A096LNT2 108 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 IGHV7-81A0A0B4J1V7 117 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 H3BUA1 57 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 CLDN34H7C241 214 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 K7EIM0 57 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 OR2C1O95371 312 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 TOMM40O96008 361 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 S100A9P06702 114 aaKnown RBP5.26□□□□□ -1.57
LDB3-206ENST00000477489 RAB9AP51151 201 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 FLI1Q01543 452 aaPredicted RBP5.26□□□□□ -1.57
LDB3-206ENST00000477489 DEFB113Q30KQ7 82 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 C9orf139Q6ZV77 190 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 MIR17HGQ75NE6 70 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 IQCF2Q8IXL9 164 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 ARL6IP6Q8N6S5 226 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 TMEM37Q8WXS4 190 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 IMMP2LQ96T52 175 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 TMPRSS5Q9H3S3 457 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 APCP25054 2843 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 SPG11Q96JI7 2443 aa5.26□□□□□ -1.57
LDB3-206ENST00000477489 AKAP6Q13023 2319 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 MTORP42345 2549 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 COLCA2A8K830 154 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 OR7C2O60412 319 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 NDUFB8O95169 186 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 IGF1P05019 195 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 REG1AP05451 166 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 RD3LP0DJH9 198 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 TAS2R60P59551 318 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 UBE2L3P68036 154 aaKnown RBP5.25□□□□□ -1.57
LDB3-206ENST00000477489 PRB3Q04118 309 aaPredicted RBP5.25□□□□□ -1.57
LDB3-206ENST00000477489 ASPHD1Q5U4P2 390 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 CST9LP1Q5W188 147 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 LINC00305Q7Z4B0 112 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 C1QL4Q86Z23 238 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 CBLN2Q8IUK8 224 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 LYPD1Q8N2G4 141 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 C5orf56Q8N8D9 126 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 NECAP1Q8NC96 275 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 OR5AU1Q8NGC0 362 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 Q8WTZ3 238 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 HIST1H2BAQ96A08 127 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 FAM167A-AS1Q96KT0 104 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 PAXXQ9BUH6 204 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 SLC25A2Q9BXI2 301 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 OR51M1Q9H341 326 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 HIF1ANQ9NWT6 349 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 C21orf62Q9NYP8 219 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 HIGD1AQ9Y241 93 aa5.25□□□□□ -1.57
LDB3-206ENST00000477489 DMRT1Q9Y5R6 373 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms