RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 GNG7O60262 68 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 RD3LP0DJH9 198 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 PEA15Q15121 130 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 OR1B1Q8NGR6 318 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 PBDC1Q9BVG4 233 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 ESM1Q9NQ30 184 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 COX7A2P2O60397 106 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 BRI3O95415 125 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 TOMM40O96008 361 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 CLEC3BP05452 202 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 SFTA3P0C7M3 94 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 BCL2P10415 239 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 C10orf113Q5VZT2 155 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 TXN2Q99757 166 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 SLC25A2Q9BXI2 301 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF580Q9UK33 172 aa11.22□□□□□ -0.61
COL4A6-206ENST00000477085 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 CXorf1O96002 111 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 TRGV3P03979 118 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.61
COL4A6-206ENST00000477085 PPT1P50897 306 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 YPEL3P61236 119 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-206ENST00000477085 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF329Q86UD4 541 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 IQCF2Q8IXL9 164 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF491Q8N8L2 437 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
COL4A6-206ENST00000477085 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.61
COL4A6-206ENST00000477085 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-206ENST00000477085 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 HYPMO75409 117 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 GCHFRP30047 84 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 GPR183P32249 361 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 CD81P60033 236 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 ATP5G2Q06055 141 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 KHDC3LQ587J8 217 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 PFDN5Q99471 154 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 PRSS22Q9GZN4 317 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 TMEM160Q9NX00 188 aa11.21□□□□□ -0.62
COL4A6-206ENST00000477085 TECRQ9NZ01 308 aaKnown RBP11.21□□□□□ -0.62
COL4A6-206ENST00000477085 DNAJC9-AS1A6NH13 148 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 PAGE4O60829 102 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 APOC3P02656 99 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 C8orf88P0DMB2 117 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 TPPP2P59282 170 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 LYZP61626 148 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 SUN5Q8TC36 379 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
COL4A6-206ENST00000477085 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
COL4A6-206ENST00000477085 IGHV3-35A0A0C4DH35 117 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 FAM223BA6NKX1 122 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 H3BUA1 57 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 OR2C1O95371 312 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 HSPB1P04792 205 aaKnown RBP11.19□□□□□ -0.62
COL4A6-206ENST00000477085 PSMB3P49720 205 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-206ENST00000477085 LEMD1Q68G75 181 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 FAM223AQ8IWN6 122 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 Q8N2B8 174 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 SLC35B3Q9H1N7 401 aa11.19□□□□□ -0.62
COL4A6-206ENST00000477085 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 F8W036 122 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 IGHG4P01861 327 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 IL4P05112 153 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 OR10J4P0C629 311 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 PYYP10082 97 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 PF4V1P10720 104 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 PSMB8P28062 276 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 RAB9AP51151 201 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 UBE2G2P60604 165 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 KIAA0141Q14154 515 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 GUCA2BQ16661 112 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 RBMS3Q6XE24 437 aaKnown RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 Q71RC1 249 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 OR5AU1Q8NGC0 362 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 RNF2Q99496 336 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 CARHSP1Q9Y2V2 147 aaKnown RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 FLNBO75369 2602 aaKnown RBP11.18□□□□□ -0.62
COL4A6-206ENST00000477085 PPP5D1E7EU14 171 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 HNF1AP20823 631 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 ATRAIDQ6UW56 229 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 Q8WTZ3 238 aa11.18□□□□□ -0.62
COL4A6-206ENST00000477085 SEC11CQ9BY50 192 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms