RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 STXBP6Q8NFX7 210 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 OR51G1Q8NGK1 321 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 OR4D5Q8NGN0 318 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 GLMPQ8WWB7 406 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 C20orf85Q9H1P6 137 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 ZFP92A6NM28 416 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 K7EQG2 157 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 UBE2CO00762 179 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 POLR2GP62487 172 aaKnown RBP eCLIP15.59■□□□□ 0.09
LIME1-204ENST00000476183 CNPY1Q3B7I2 92 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 LEMD1Q68G75 181 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 STPG3Q8N7X2 389 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 DCANP1Q8TF63 244 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 GRAMD2BQ96HH9 432 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 CCDC32Q9BV29 185 aa15.59■□□□□ 0.09
LIME1-204ENST00000476183 AGRNO00468 2067 aa15.58■□□□□ 0.09
LIME1-204ENST00000476183 IGKV1OR2-108A0A075B7D4 117 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 A6NHS1 94 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 H3BP45 60 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 IFNA21P01568 189 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 SPANXN5Q5MJ07 72 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 MITD1Q8WV92 249 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 RNF125Q96EQ8 232 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 TP53TG1Q9Y2A0 90 aa15.58■□□□□ 0.08
LIME1-204ENST00000476183 SPRY2O43597 315 aa15.57■□□□□ 0.08
LIME1-204ENST00000476183 BUB3O43684 328 aa15.57■□□□□ 0.08
LIME1-204ENST00000476183 TCRBP04435 133 aa15.57■□□□□ 0.08
LIME1-204ENST00000476183 NKX2-1P43699 371 aaPredicted RBP15.57■□□□□ 0.08
LIME1-204ENST00000476183 RPP30P78346 268 aaKnown RBP15.57■□□□□ 0.08
LIME1-204ENST00000476183 LINC00299Q6ZSB3 139 aa15.57■□□□□ 0.08
LIME1-204ENST00000476183 RNF183Q96D59 192 aa15.57■□□□□ 0.08
LIME1-204ENST00000476183 THAP8Q8NA92 274 aa15.56■□□□□ 0.08
LIME1-204ENST00000476183 TRGV9Q99603 122 aa15.56■□□□□ 0.08
LIME1-204ENST00000476183 PBDC1Q9BVG4 233 aa15.56■□□□□ 0.08
LIME1-204ENST00000476183 CSTL1Q9H114 145 aa15.56■□□□□ 0.08
LIME1-204ENST00000476183 RYR2Q92736 4967 aa15.56■□□□□ 0.08
LIME1-204ENST00000476183 TRAV6A0A075B6T7 132 aa15.55■□□□□ 0.08
LIME1-204ENST00000476183 HELTA6NFD8 242 aa15.55■□□□□ 0.08
LIME1-204ENST00000476183 SSSCA1O60232 199 aa15.55■□□□□ 0.08
LIME1-204ENST00000476183 ZNF688P0C7X2 276 aa15.55■□□□□ 0.08
LIME1-204ENST00000476183 OR2F1Q13607 317 aa15.55■□□□□ 0.08
LIME1-204ENST00000476183 STRAPQ9Y3F4 350 aaKnown RBP15.55■□□□□ 0.08
LIME1-204ENST00000476183 EIF2B2P49770 351 aaKnown RBP15.54■□□□□ 0.08
LIME1-204ENST00000476183 PAX9P55771 341 aa15.54■□□□□ 0.08
LIME1-204ENST00000476183 IAH1Q2TAA2 248 aaPredicted RBP15.54■□□□□ 0.08
LIME1-204ENST00000476183 ZBTB8BQ8NAP8 495 aaPredicted RBP15.54■□□□□ 0.08
LIME1-204ENST00000476183 NUDT15Q9NV35 164 aa15.54■□□□□ 0.08
LIME1-204ENST00000476183 PSENENQ9NZ42 101 aa15.54■□□□□ 0.08
LIME1-204ENST00000476183 TBC1D24Q9ULP9 559 aa15.54■□□□□ 0.08
LIME1-204ENST00000476183 PLECQ15149 4684 aaKnown RBP15.53■□□□□ 0.08
LIME1-204ENST00000476183 AP2S1P53680 142 aaPredicted RBP15.53■□□□□ 0.08
LIME1-204ENST00000476183 LYZP61626 148 aa15.53■□□□□ 0.08
LIME1-204ENST00000476183 OR8G2PQ6IF36 304 aa15.53■□□□□ 0.08
LIME1-204ENST00000476183 SIGLEC15Q6ZMC9 328 aa15.53■□□□□ 0.08
LIME1-204ENST00000476183 ACOT7LQ6ZUV0 252 aa15.53■□□□□ 0.08
LIME1-204ENST00000476183 SEC22CQ9BRL7 303 aa15.53■□□□□ 0.08
LIME1-204ENST00000476183 A0A0J9YWU9 116 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 PMS2P5A8MQ11 134 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 SNRPGP15A8MWD9 76 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 CCSO14618 274 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 CCNKO75909 580 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 EWSR1Q01844 656 aaKnown RBP eCLIP15.52■□□□□ 0.08
LIME1-204ENST00000476183 S100ZQ8WXG8 99 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 SMIM8Q96KF7 97 aa15.52■□□□□ 0.08
LIME1-204ENST00000476183 KNCNA6PVL3 124 aa15.51■□□□□ 0.07
LIME1-204ENST00000476183 SCGB1D2O95969 90 aa15.51■□□□□ 0.07
LIME1-204ENST00000476183 FABP1P07148 127 aa15.51■□□□□ 0.07
LIME1-204ENST00000476183 TMEM182Q6ZP80 229 aaPredicted RBP15.51■□□□□ 0.07
LIME1-204ENST00000476183 NRN1Q9NPD7 142 aa15.51■□□□□ 0.07
LIME1-204ENST00000476183 GSKIPQ9P0R6 139 aa15.51■□□□□ 0.07
LIME1-204ENST00000476183 RCL1Q9Y2P8 373 aaKnown RBP15.51■□□□□ 0.07
LIME1-204ENST00000476183 DNAH1Q9P2D7 4330 aa15.5■□□□□ 0.07
LIME1-204ENST00000476183 H2AFB2P0C5Z0 115 aa15.5■□□□□ 0.07
LIME1-204ENST00000476183 GATA2P23769 480 aaPredicted RBP15.5■□□□□ 0.07
LIME1-204ENST00000476183 TMEM14EPQ6UXP3 125 aa15.5■□□□□ 0.07
LIME1-204ENST00000476183 TRPT1Q86TN4 253 aaKnown RBP15.5■□□□□ 0.07
LIME1-204ENST00000476183 STHQ8IWL8 128 aa15.5■□□□□ 0.07
LIME1-204ENST00000476183 IL17DQ8TAD2 202 aa15.5■□□□□ 0.07
LIME1-204ENST00000476183 ZNF431Q8TF32 576 aaPredicted RBP15.5■□□□□ 0.07
LIME1-204ENST00000476183 FAM240BA0A1B0GVZ2 78 aa15.49■□□□□ 0.07
LIME1-204ENST00000476183 CA1P00915 261 aaPredicted RBP15.49■□□□□ 0.07
LIME1-204ENST00000476183 MBPP02686 304 aaPredicted RBP15.49■□□□□ 0.07
LIME1-204ENST00000476183 GIG44P09565 113 aaPredicted RBP15.49■□□□□ 0.07
LIME1-204ENST00000476183 AKR1C1Q04828 323 aa15.49■□□□□ 0.07
LIME1-204ENST00000476183 ASAH1Q13510 395 aa15.49■□□□□ 0.07
LIME1-204ENST00000476183 PSMG4Q5JS54 123 aa15.49■□□□□ 0.07
LIME1-204ENST00000476183 METTL15P1P0C7V9 234 aa15.48■□□□□ 0.07
LIME1-204ENST00000476183 NUP62P37198 522 aaPredicted RBP15.48■□□□□ 0.07
LIME1-204ENST00000476183 ACTL10Q5JWF8 245 aa15.48■□□□□ 0.07
LIME1-204ENST00000476183 GSG1LQ6UXU4 331 aa15.48■□□□□ 0.07
LIME1-204ENST00000476183 TMEM144Q7Z5S9 345 aa15.48■□□□□ 0.07
LIME1-204ENST00000476183 RAB40CQ96S21 281 aa15.48■□□□□ 0.07
LIME1-204ENST00000476183 PTTG2Q9NZH5 202 aa15.48■□□□□ 0.07
LIME1-204ENST00000476183 IFITM3Q01628 133 aa15.47■□□□□ 0.07
LIME1-204ENST00000476183 C1orf194Q5T5A4 169 aa15.47■□□□□ 0.07
LIME1-204ENST00000476183 C12orf45Q8N5I9 185 aaPredicted RBP15.47■□□□□ 0.07
LIME1-204ENST00000476183 GATAD1Q8WUU5 269 aa15.47■□□□□ 0.07
LIME1-204ENST00000476183 WDR12Q9GZL7 423 aaKnown RBP15.47■□□□□ 0.07
LIME1-204ENST00000476183 PFDN2Q9UHV9 154 aa15.47■□□□□ 0.07
LIME1-204ENST00000476183 SMCO3A2RU48 225 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms