RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 TRGC2P03986 189 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 SRD5A1P18405 259 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 HBG1P69891 147 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 HBG2P69892 147 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 OR5R1Q8NH85 324 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 SGMS2Q8NHU3 365 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 SCGB1C1Q8TD33 95 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 RSG1Q9BU20 258 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 F11RQ9Y624 299 aaKnown RBP14.19□□□□□ -0.14
ATG4B-217ENST00000475693 DNAJC9-AS1A6NH13 148 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 MS4A10Q96PG2 267 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 SDF2L1Q9HCN8 221 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 RPRMQ9NS64 109 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 URGCP-MRPS24S4R325 110 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 OPRK1P41145 380 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 C10orf99Q6UWK7 81 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 LCNL1Q6ZST4 164 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 GNG13Q9P2W3 67 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 PHOX2AO14813 284 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 IFNA1P01562 189 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 IGHV3-23P01764 117 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 OR10D4PQ8NGN7 298 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 FANCD2OSQ96PS1 177 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 VAX2Q9UIW0 290 aa14.18□□□□□ -0.14
ATG4B-217ENST00000475693 DEFA6Q01524 100 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 GAMTQ14353 236 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 ZNF329Q86UD4 541 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 OR1P1Q8NH06 330 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 ZNF355PQ9NSJ1 428 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 FAM181BA6NEQ2 426 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 IGHG2P01859 326 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 TRGC1P0CF51 173 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 TTC9CQ8N5M4 171 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 ACY3Q96HD9 319 aa14.17□□□□□ -0.14
ATG4B-217ENST00000475693 IGKV1OR2-108A0A075B7D4 117 aa14.16□□□□□ -0.14
ATG4B-217ENST00000475693 OR2J3O76001 311 aa14.16□□□□□ -0.14
ATG4B-217ENST00000475693 MT-CO2P00403 227 aa14.16□□□□□ -0.14
ATG4B-217ENST00000475693 SUB1P53999 127 aaKnown RBP eCLIP14.16□□□□□ -0.14
ATG4B-217ENST00000475693 HIST2H2BDQ6DRA6 164 aa14.16□□□□□ -0.14
ATG4B-217ENST00000475693 TREML4Q6UXN2 200 aa14.16□□□□□ -0.14
ATG4B-217ENST00000475693 TIMM9Q9Y5J7 89 aa14.16□□□□□ -0.14
ATG4B-217ENST00000475693 CRYGCP07315 174 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 CD69Q07108 199 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 TMEM41BQ5BJD5 291 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 TEX29Q8N6K0 151 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 ZNF114Q8NC26 417 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 FRZBQ92765 325 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 TMEM147Q9BVK8 224 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 GPR61Q9BZJ8 451 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 TRAV41A0A0B4J266 112 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 NDUFB8O95169 186 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 FGF7P21781 194 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 ZNF726P1Q15940 193 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 CENPVQ7Z7K6 275 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-217ENST00000475693 PYGO2Q9BRQ0 406 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 WDR61Q9GZS3 305 aaKnown RBP14.15□□□□□ -0.14
ATG4B-217ENST00000475693 TMEM160Q9NX00 188 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 CDC42EP3Q9UKI2 254 aa14.15□□□□□ -0.14
ATG4B-217ENST00000475693 JMJD1CQ15652 2540 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 M0QZK8 103 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 LY86O95711 162 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 GATA2P23769 480 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-217ENST00000475693 GPX4P36969 197 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-217ENST00000475693 C16orf82Q7Z2V1 217 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 NPIPB3Q92617 1050 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 ZNF702PQ9H963 129 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 NPIPB5A8MRT5 1133 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 PKIAP61925 76 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 VWC2Q2TAL6 325 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 SRD5A3Q9H8P0 318 aa14.14□□□□□ -0.15
ATG4B-217ENST00000475693 I3L2K1 104 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 K7EIM0 57 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 SSTP61278 116 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 PVRIGQ6DKI7 326 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 CYP2G1PQ6ZSU1 146 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 RNASEH2CQ8TDP1 164 aaKnown RBP14.13□□□□□ -0.15
ATG4B-217ENST00000475693 KLK15Q9H2R5 256 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 VSIRQ9H7M9 311 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 NAT8Q9UHE5 227 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 IGLV11-55A0A075B6I3 123 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 TMEM250H0YL14 139 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 C19orf54Q5BKX5 351 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 COA6Q5JTJ3 125 aaKnown RBP14.13□□□□□ -0.15
ATG4B-217ENST00000475693 MRPL41Q8IXM3 137 aaKnown RBP14.13□□□□□ -0.15
ATG4B-217ENST00000475693 MGST2Q99735 147 aa14.13□□□□□ -0.15
ATG4B-217ENST00000475693 SRSF8Q9BRL6 282 aaKnown RBP14.13□□□□□ -0.15
ATG4B-217ENST00000475693 MDKP21741 143 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-217ENST00000475693 ATP6V1FQ16864 119 aa14.12□□□□□ -0.15
ATG4B-217ENST00000475693 TSTD3H0UI37 97 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 IGF1P05019 195 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
ATG4B-217ENST00000475693 GFI1BQ5VTD9 330 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 LCN15Q6UWW0 184 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 TMEM183AQ8IXX5 376 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 FAM110DQ8TAY7 271 aaPredicted RBP14.11□□□□□ -0.15
ATG4B-217ENST00000475693 NPCDR1Q9BY65 106 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 NPVFQ9HCQ7 196 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 WDR83OSQ9Y284 106 aa14.11□□□□□ -0.15
ATG4B-217ENST00000475693 MAP1LC3B2A6NCE7 125 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms