RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 KDM5BQ9UGL1 1544 aa2.77□□□□□ -1.97
SRGAP3-205ENST00000475560 SCAF11Q99590 1463 aaKnown RBP2.77□□□□□ -1.97
SRGAP3-205ENST00000475560 IGHV1-18A0A0C4DH31 117 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 A0A0D9SG52 128 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 A0A1B0GVG6 124 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 C7orf71A4D174 169 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 EFCAB10A6NFE3 127 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 CST7O76096 145 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 ZNF90Q03938 601 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 MSMO1Q15800 293 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 IGFBP7Q16270 282 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 MORN2Q502X0 79 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 DPPA3Q6W0C5 159 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 ZC2HC1AQ96GY0 325 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 ADAT1Q9BUB4 502 aaKnown RBP2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 CACYBPQ9HB71 228 aaKnown RBP2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 POPDC3Q9HBV1 291 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 NAT8BQ9UHF3 227 aa2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 VIRMAQ69YN4 1812 aaKnown RBP2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 XIRP1Q702N8 1843 aaKnown RBP2.76□□□□□ -1.97
SRGAP3-205ENST00000475560 MED23Q9ULK4 1368 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 SLIT2O94813 1529 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 IGHV3-64A0A075B6Q5 118 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 TRAV5A0A0B4J249 113 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 J3QQQ9 107 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 NDUFA2O43678 99 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 SHBGP04278 402 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 P0DMU3 169 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 FAM231AP0DMU4 169 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 FAM231CP0DMU5 169 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 CSRP1P21291 193 aaKnown RBP2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 TMBIM6P55061 237 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 VMA21Q3ZAQ7 101 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 PDZD9Q8IXQ8 264 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 PRADC1Q9BSG0 188 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 NPCDR1Q9BY65 106 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 COPZ2Q9P299 210 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 PSORS1C2Q9UIG4 136 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 HSPB8Q9UJY1 196 aa2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 ARHGEF28Q8N1W1 1705 aaKnown RBP2.75□□□□□ -1.97
SRGAP3-205ENST00000475560 MYH7BA7E2Y1 1941 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 K7ERJ3 54 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 SDCBPO00560 298 aaPredicted RBP2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 PGLYRP1O75594 196 aaPredicted RBP2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 LYZL6O75951 148 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 NAPSAO96009 420 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 CTSGP08311 255 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 HTR1AP08908 422 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 CRYGAP11844 174 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 COX4I1P13073 169 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 SDC4P31431 198 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 SDC2P34741 201 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 PHF5AQ7RTV0 110 aaKnown RBP2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 C3orf56Q8N813 242 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 SLC30A7Q8NEW0 376 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 OR4E2Q8NGC2 313 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 AQP3Q92482 292 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 PFDN5Q99471 154 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 PKMYT1Q99640 499 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 TCEAL2Q9H3H9 227 aaPredicted RBP2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 CACNA1AO00555 2505 aa2.74□□□□□ -1.97
SRGAP3-205ENST00000475560 PRDM2Q13029 1718 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 ANKRD31Q8N7Z5 1873 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 A2MP01023 1474 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 IGLV10-54A0A075B6I4 117 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 MUC21A0A0G2JKD1 596 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 TRBV7-6A0A0J9YX20 115 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 LOC107984640A0A0U1RRK4 108 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 OR51F1A6NGY5 319 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 RFPL4AA6NLU0 287 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 C9JAW5 83 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 RFPL4AL1F8VTS6 287 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 HIST1H2BKO60814 126 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 TNFSF15O95150 251 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 HIST1H2BJP06899 126 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 SCTP09683 121 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 UBBP0CG47 229 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 FABP2P12104 132 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 HLA-EP13747 358 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 CMPK1P30085 196 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 RPL35P42766 123 aaKnown RBP2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 DYNLT1P63172 113 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 HBBP68871 147 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 MYL5Q02045 173 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 RELAQ04206 551 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 DEFB128Q7Z7B8 93 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 LRRC18Q8N456 261 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 MRPS24Q96EL2 167 aaKnown RBP2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 TPT1P8Q9HAU6 139 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 HIGD1AQ9Y241 93 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 N4BP2Q86UW6 1770 aaPredicted RBP2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 NUP210Q8TEM1 1887 aaPredicted RBP2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 RFX7Q2KHR2 1363 aa2.73□□□□□ -1.97
SRGAP3-205ENST00000475560 ZNF407Q9C0G0 2248 aa2.72□□□□□ -1.97
SRGAP3-205ENST00000475560 A0A1W2PNN7 141 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms