RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DGCR14Q96DF8 476 aaKnown RBP0.74□□□□□ -2.29
LTN1-204ENST00000475344 EPDR1Q9UM22 224 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 SLC35A3Q9Y2D2 325 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 ASCC3Q8N3C0 2202 aaKnown RBP0.73□□□□□ -2.29
LTN1-204ENST00000475344 ARHGEF28Q8N1W1 1705 aaKnown RBP0.73□□□□□ -2.29
LTN1-204ENST00000475344 TRAV12-1A0A0B4J245 112 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 LYZL6O75951 148 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 SERPINB9P50453 376 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 CNBPP62633 177 aaKnown RBP0.73□□□□□ -2.29
LTN1-204ENST00000475344 FADDQ13158 208 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 DEFB113Q30KQ7 82 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 S100A7AQ86SG5 101 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 Q8N814 137 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 SFT2D1Q8WV19 159 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 TLNRD1Q9H1K6 362 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 RASL12Q9NYN1 266 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 UTP11Q9Y3A2 253 aaKnown RBP0.73□□□□□ -2.29
LTN1-204ENST00000475344 MED1Q15648 1581 aaPredicted RBP0.73□□□□□ -2.29
LTN1-204ENST00000475344 MYH2Q9UKX2 1941 aa0.73□□□□□ -2.29
LTN1-204ENST00000475344 GPR98Q8WXG9 6306 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 RTL1A6NKG5 1358 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 MYO5AQ9Y4I1 1855 aaKnown RBP0.72□□□□□ -2.29
LTN1-204ENST00000475344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
LTN1-204ENST00000475344 A0A087X0T9 212 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 INE1O15225 51 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 SULT1B1O43704 296 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 OR7C1O76099 320 aaPredicted RBP0.72□□□□□ -2.29
LTN1-204ENST00000475344 TEX47Q8TBZ9 253 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 TVP23BQ9NYZ1 205 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
LTN1-204ENST00000475344 TRBV6-8A0A0A6YYG3 113 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 IFNA6P05013 189 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 SPA17Q15506 151 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 TSNQ15631 228 aaKnown RBP0.71□□□□□ -2.3
LTN1-204ENST00000475344 BRMS1LQ5PSV4 323 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 GDF5OSQ5U4N7 250 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 STAG3L4Q8TBR4 150 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 OBSCN-AS1Q96MR7 158 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 HIST1H2BLQ99880 126 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 KIFC1Q9BW19 673 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 TMEM133Q9H2Q1 129 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 ZFP30Q9Y2G7 519 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 MYH3P11055 1940 aa0.71□□□□□ -2.3
LTN1-204ENST00000475344 PCF11O94913 1555 aaKnown RBP0.7□□□□□ -2.3
LTN1-204ENST00000475344 ALPK3Q96L96 1907 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 FAM159BA6NKW6 160 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 TMEM210A6NLX4 147 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 CYB5BO43169 146 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 CST2P09228 141 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 CYBAP13498 195 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 RNASE4P34096 147 aaKnown RBP0.7□□□□□ -2.3
LTN1-204ENST00000475344 ANP32AP39687 249 aaKnown RBP0.7□□□□□ -2.3
LTN1-204ENST00000475344 RHOBP62745 196 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 REEP5Q00765 189 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 ESRGQ1W209 222 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 C1orf137Q5JT78 98 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 C3orf56Q8N813 242 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 OR11H6Q8NGC7 330 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 SLAMF6Q96DU3 332 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 NMNAT1Q9HAN9 279 aaPredicted RBP0.7□□□□□ -2.3
LTN1-204ENST00000475344 BCL2L10Q9HD36 194 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 ACER3Q9NUN7 267 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 FAM32AQ9Y421 112 aaKnown RBP0.7□□□□□ -2.3
LTN1-204ENST00000475344 RIMBP3CA6NJZ7 1639 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 RIMBP3BA6NNM3 1639 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 RIMBP3Q9UFD9 1639 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 ZFC3H1O60293 1989 aaKnown RBP0.7□□□□□ -2.3
LTN1-204ENST00000475344 PTPRFP10586 1907 aa0.7□□□□□ -2.3
LTN1-204ENST00000475344 TRAV4A0A0B4J268 109 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 ERP29P30040 261 aaKnown RBP0.69□□□□□ -2.3
LTN1-204ENST00000475344 ATP5G3P48201 142 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 PIGPP57054 158 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 DYNLT1P63172 113 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 LIN52Q52LA3 116 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 Q8IYB0 196 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 CLECL1Q8IZS7 167 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 GNPDA2Q8TDQ7 276 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 FAM172AQ8WUF8 416 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 BTF3L4Q96K17 158 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 PRADC1Q9BSG0 188 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 C9orf16Q9BUW7 83 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 PARVBQ9HBI1 364 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 ENY2Q9NPA8 101 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 C14orf132Q9NPU4 83 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 NUP210LQ5VU65 1888 aa0.69□□□□□ -2.3
LTN1-204ENST00000475344 FREM3P0C091 2139 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 TET1Q8NFU7 2136 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 LAMB4A4D0S4 1761 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 GADD45GO95257 159 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 SERPINA1P01009 418 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 HSD11B1P28845 292 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 CAPZBP47756 277 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 EIF5AP63241 154 aaKnown RBP0.68□□□□□ -2.3
LTN1-204ENST00000475344 RRN3P1Q2M238 152 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 AKIRIN2Q53H80 203 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 TEX261Q6UWH6 196 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 SOSTDC1Q6X4U4 206 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 LINC00301Q8NCQ3 95 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 OR10X1Q8NGY0 326 aa0.68□□□□□ -2.3
LTN1-204ENST00000475344 OR2T10Q8NGZ9 312 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms