RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 F8W735 103 aaPredicted RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 H3BRN7 92 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 PEX7O00628 323 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 ISLRO14498 428 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 RNF224P0DH78 156 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 EGR2P11161 476 aaPredicted RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 ORM2P19652 201 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 FCGR2BP31994 310 aaPredicted RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 BRS3P32247 399 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 SAA4P35542 130 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 GNG4P50150 75 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 MEOX2P50222 304 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 YPEL3P61236 119 aaPredicted RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 TIGITQ495A1 244 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 OR5T1Q8NG75 326 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 RBM14Q96PK6 669 aaKnown RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 CCL19Q99731 98 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 RASL11BQ9BPW5 248 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 FAM103A1Q9BTL3 118 aaKnown RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 GSX1Q9H4S2 264 aaPredicted RBP7.73□□□□□ -1.17
USP39-214ENST00000474572 HIGD1AQ9Y241 93 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 V9GYV3 84 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 ITPR1Q14643 2758 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 NCOR2Q9Y618 2525 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 ZZEF1O43149 2961 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 CENPVL3A0A0U1RRI6 287 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 IFITM10A6NMD0 228 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 NPFFO15130 113 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 FAM106CPP0CH98 169 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 PAX1P15863 534 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 NDUFA6P56556 154 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 FAM231DQ6ZW35 169 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 SGMS2Q8NHU3 365 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 FAM110DQ8TAY7 271 aaPredicted RBP7.72□□□□□ -1.17
USP39-214ENST00000474572 FAM168AQ92567 244 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 SLC25A39Q9BZJ4 359 aaPredicted RBP7.72□□□□□ -1.17
USP39-214ENST00000474572 C7orf69Q9H7B7 122 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 KLF12Q9Y4X4 402 aa7.72□□□□□ -1.17
USP39-214ENST00000474572 IGHV4-61A0A0C4DH41 118 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.18
USP39-214ENST00000474572 RD3LP0DJH9 198 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 CNN1P51911 297 aaKnown RBP7.71□□□□□ -1.18
USP39-214ENST00000474572 MFAP4P55083 255 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 LYZP61626 148 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 TMEM183BQ1AE95 376 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 FAM120AOSQ5T036 256 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 ZNF600Q6ZNG1 722 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 PIP4P2Q8N4L2 257 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 ZNF491Q8N8L2 437 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 C5orf17Q8NAS9 161 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 C12orf57Q99622 126 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 TXN2Q99757 166 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 SHANK2-AS3Q9BTD1 123 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 PITPNC1Q9UKF7 332 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 EPDR1Q9UM22 224 aa7.71□□□□□ -1.18
USP39-214ENST00000474572 TRBV6-1A0A0K0K1D8 114 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 NCBP2LA6PVI3 153 aaKnown RBP7.7□□□□□ -1.18
USP39-214ENST00000474572 NDUFB8O95169 186 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 S100A9P06702 114 aaKnown RBP7.7□□□□□ -1.18
USP39-214ENST00000474572 HIST1H1EP10412 219 aaKnown RBP7.7□□□□□ -1.18
USP39-214ENST00000474572 HIST1H1BP16401 226 aaKnown RBP7.7□□□□□ -1.18
USP39-214ENST00000474572 HNF1AP20823 631 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 CRIP2P52943 208 aaPredicted RBP7.7□□□□□ -1.18
USP39-214ENST00000474572 ERVFC1-1P60608 527 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 OR5I1Q13606 314 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 CLEC12BQ2HXU8 276 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 VN1R17PQ8TDU5 208 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 MBD6Q96DN6 1003 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 RNF125Q96EQ8 232 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 TMEM68Q96MH6 324 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 HSPB9Q9BQS6 159 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 MEGF9Q9H1U4 602 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 C21orf62Q9NYP8 219 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 THYN1Q9P016 225 aa7.7□□□□□ -1.18
USP39-214ENST00000474572 DCHS2Q6V1P9 2916 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 PKD1L2Q7Z442 2459 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 IGHV1-69DA0A0B4J2H0 117 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 ZNF320A2RRD8 509 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 PGPA6NDG6 321 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 SLC17A3O00476 420 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 GNG7O60262 68 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 IGHV1-69P01742 117 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 IGLC2P0DOY2 106 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 RPEL1Q2QD12 228 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 KLF17Q5JT82 389 aaPredicted RBP7.69□□□□□ -1.18
USP39-214ENST00000474572 CLEC2AQ6UVW9 174 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 TMEM183AQ8IXX5 376 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 LYPD1Q8N2G4 141 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 C5orf56Q8N8D9 126 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 ATG101Q9BSB4 218 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 Q9H3A6 140 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 OTORQ9NRC9 128 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 ZNF586Q9NXT0 402 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms