RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 RPS23P62266 143 aaKnown RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 LCN6P62502 163 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 RANP62826 216 aaKnown RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 CCL7P80098 99 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SERF2P84101 59 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 ZNF616Q08AN1 781 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 FOXF1Q12946 379 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SRSF6Q13247 344 aaKnown RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 PSG3Q16557 428 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 MPV17LQ2QL34 196 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 IAH1Q2TAA2 248 aaPredicted RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 TMEM249Q2WGJ8 235 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SMIM21Q3B7S5 101 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 PDZD11Q5EBL8 140 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 AKR1C8PQ5T2L2 129 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SAMD13Q5VXD3 122 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 HEPN1Q6WQI6 88 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SLC35E3Q7Z769 313 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 RPS19BP1Q86WX3 136 aaKnown RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 OR2M7Q8NG81 312 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 OR10J5Q8NHC4 309 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 FNDC9Q8TBE3 224 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 RNASEH2CQ8TDP1 164 aaKnown RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 MBD3L1Q8WWY6 194 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 PATE1Q8WXA2 126 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SPTSSAQ969W0 71 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 RPEQ96AT9 228 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 TVP23CQ96ET8 276 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 SFRP2Q96HF1 295 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 ARHGAP5-AS1Q96IT6 56 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 BTF3L4Q96K17 158 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 YPEL4Q96NS1 127 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 GPER1Q99527 375 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 RNF5Q99942 180 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 CMSS1Q9BQ75 279 aaKnown RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 GGACTQ9BVM4 153 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 PARD6GQ9BYG4 376 aaPredicted RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 CHST5Q9GZS9 411 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 FGF23Q9GZV9 251 aaPredicted RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 TCEAL2Q9H3H9 227 aaPredicted RBP1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 C11orf1Q9H5F2 150 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 OR2S2Q9NQN1 319 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 PLEKHJ1Q9NW61 149 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 DKKL1Q9UK85 242 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 LHFPL6Q9Y693 200 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 DOCK8Q8NF50 2099 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 DENND4CQ5VZ89 1909 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 PLXND1Q9Y4D7 1925 aa1.95□□□□□ -2.1
TMEM50B-208ENST00000474272 NUP210Q8TEM1 1887 aaPredicted RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 COL4A2P08572 1712 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 IGKV1D-43A0A0B4J1Z2 117 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 C3orf85A0A1B0GTC6 90 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 TMEM213A2RRL7 107 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 ZNF850A8MQ14 1090 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 C9J4A7 227 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 CLDN34H7C241 214 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 J3QR89 54 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 SDCBPO00560 298 aaPredicted RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 HMGB3O15347 200 aaKnown RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 XRCC2O43543 280 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 PITX3O75364 302 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 OR2J2O76002 312 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 TNFSF15O95150 251 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 HLA-HP01893 362 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 HLA-DQA1P01909 254 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 CSN2P05814 226 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 SRP19P09132 144 aaKnown RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 CST2P09228 141 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 PGA5P0DJD9 388 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 ZNF728P0DKX0 622 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 USF1P22415 310 aaPredicted RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 CRYGSP22914 178 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 NFYBP25208 207 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 LOXP28300 417 aaPredicted RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 APLNRP35414 380 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 CD200P41217 278 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 SULT1A1P50225 295 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 AKR1C2P52895 323 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 PIGPP57054 158 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 KLF3P57682 345 aaPredicted RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 TCTAP57738 103 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 OR2B8PP59922 312 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 PPP1CAP62136 330 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 RPL23P62829 140 aaKnown RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 HLA-DRB3P79483 266 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 AKR1C1Q04828 323 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 FABP9Q0Z7S8 132 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 PRDX4Q13162 271 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 RBMY1FQ15415 496 aaKnown RBP1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 MSMO1Q15800 293 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 DEFB110Q30KQ9 67 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 PLPPR5Q32ZL2 321 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 GCSAMLQ5JQS6 135 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 LYZL2Q7Z4W2 148 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 LINC00596Q86U02 117 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 C20orf196Q8IYI0 205 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 OSR2Q8N2R0 312 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 FAM24BQ8N5W8 94 aa1.94□□□□□ -2.1
TMEM50B-208ENST00000474272 TCTEX1D1Q8N7M0 179 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms