RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 WRBO00258 174 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 SYNGR2O43760 224 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 OR4E1P0C645 316 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 ANXA7P20073 488 aaKnown RBP13.19□□□□□ -0.3
UPF3A-203ENST00000474056 RAB11AP62491 216 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 LYG2Q86SG7 212 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 IL17DQ8TAD2 202 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 CIB3Q96Q77 187 aaPredicted RBP13.19□□□□□ -0.3
UPF3A-203ENST00000474056 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
UPF3A-203ENST00000474056 A0A0J9YWU9 116 aa13.18□□□□□ -0.3
UPF3A-203ENST00000474056 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
UPF3A-203ENST00000474056 ZNF90Q03938 601 aa13.18□□□□□ -0.3
UPF3A-203ENST00000474056 OR51G1Q8NGK1 321 aa13.18□□□□□ -0.3
UPF3A-203ENST00000474056 COQ8AQ8NI60 647 aa13.18□□□□□ -0.3
UPF3A-203ENST00000474056 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
UPF3A-203ENST00000474056 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
UPF3A-203ENST00000474056 PLA2G10O15496 165 aa13.17□□□□□ -0.3
UPF3A-203ENST00000474056 BUB3O43684 328 aa13.17□□□□□ -0.3
UPF3A-203ENST00000474056 ZNF688P0C7X2 276 aa13.17□□□□□ -0.3
UPF3A-203ENST00000474056 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
UPF3A-203ENST00000474056 LCE6AA0A183 80 aa13.16□□□□□ -0.3
UPF3A-203ENST00000474056 HELTA6NFD8 242 aa13.16□□□□□ -0.3
UPF3A-203ENST00000474056 H3BP45 60 aa13.16□□□□□ -0.3
UPF3A-203ENST00000474056 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
UPF3A-203ENST00000474056 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
UPF3A-203ENST00000474056 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
UPF3A-203ENST00000474056 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 LYRM1O43325 122 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
UPF3A-203ENST00000474056 LYZP61626 148 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
UPF3A-203ENST00000474056 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
UPF3A-203ENST00000474056 ID3Q02535 119 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 SPANXN5Q5MJ07 72 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 STHQ8IWL8 128 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
UPF3A-203ENST00000474056 DNAH1Q9P2D7 4330 aa13.15□□□□□ -0.31
UPF3A-203ENST00000474056 KNCNA6PVL3 124 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
UPF3A-203ENST00000474056 IFNA21P01568 189 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 AP2S1P53680 142 aaPredicted RBP13.14□□□□□ -0.31
UPF3A-203ENST00000474056 OR2F1Q13607 317 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 OR8G2PQ6IF36 304 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 THAP8Q8NA92 274 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 TRGV9Q99603 122 aa13.14□□□□□ -0.31
UPF3A-203ENST00000474056 NKX2-1P43699 371 aaPredicted RBP13.13□□□□□ -0.31
UPF3A-203ENST00000474056 TRPT1Q86TN4 253 aaKnown RBP13.13□□□□□ -0.31
UPF3A-203ENST00000474056 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
UPF3A-203ENST00000474056 NRN1Q9NPD7 142 aa13.13□□□□□ -0.31
UPF3A-203ENST00000474056 STRAPQ9Y3F4 350 aaKnown RBP13.13□□□□□ -0.31
UPF3A-203ENST00000474056 ALMS1Q8TCU4 4167 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 SSSCA1O60232 199 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 CNPY1Q3B7I2 92 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 PSMG4Q5JS54 123 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 ACOT7LQ6ZUV0 252 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 RARRES2Q99969 163 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 PSENENQ9NZ42 101 aa13.12□□□□□ -0.31
UPF3A-203ENST00000474056 SNRPGP15A8MWD9 76 aa13.11□□□□□ -0.31
UPF3A-203ENST00000474056 TCRBP04435 133 aa13.11□□□□□ -0.31
UPF3A-203ENST00000474056 FABP1P07148 127 aa13.11□□□□□ -0.31
UPF3A-203ENST00000474056 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-203ENST00000474056 IAH1Q2TAA2 248 aaPredicted RBP13.11□□□□□ -0.31
UPF3A-203ENST00000474056 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
UPF3A-203ENST00000474056 TRAV6A0A075B6T7 132 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 PMS2P5A8MQ11 134 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 CCNKO75909 580 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 SCGB1D2O95969 90 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
UPF3A-203ENST00000474056 AKR1C1Q04828 323 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 ZBTB8BQ8NAP8 495 aaPredicted RBP13.1□□□□□ -0.31
UPF3A-203ENST00000474056 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 CCDC32Q9BV29 185 aa13.1□□□□□ -0.31
UPF3A-203ENST00000474056 C4BPBP20851 252 aa13.09□□□□□ -0.31
UPF3A-203ENST00000474056 GATA2P23769 480 aaPredicted RBP13.09□□□□□ -0.31
UPF3A-203ENST00000474056 PAX9P55771 341 aa13.09□□□□□ -0.31
UPF3A-203ENST00000474056 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
UPF3A-203ENST00000474056 GSG1LQ6UXU4 331 aa13.09□□□□□ -0.31
UPF3A-203ENST00000474056 TMEM182Q6ZP80 229 aaPredicted RBP13.09□□□□□ -0.31
UPF3A-203ENST00000474056 PPP1R14BQ96C90 147 aa13.09□□□□□ -0.31
UPF3A-203ENST00000474056 RAB40CQ96S21 281 aa13.09□□□□□ -0.31
UPF3A-203ENST00000474056 PFDN2Q9UHV9 154 aa13.09□□□□□ -0.31
UPF3A-203ENST00000474056 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 CCSO14618 274 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 SPP1P10451 314 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 ATF4P18848 351 aaPredicted RBP13.08□□□□□ -0.32
UPF3A-203ENST00000474056 SMIM8Q96KF7 97 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 SEC22CQ9BRL7 303 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 WDR12Q9GZL7 423 aaKnown RBP13.08□□□□□ -0.32
UPF3A-203ENST00000474056 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
UPF3A-203ENST00000474056 NUDT15Q9NV35 164 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 GSKIPQ9P0R6 139 aa13.08□□□□□ -0.32
UPF3A-203ENST00000474056 RCL1Q9Y2P8 373 aaKnown RBP13.08□□□□□ -0.32
UPF3A-203ENST00000474056 C1orf194Q5T5A4 169 aa13.07□□□□□ -0.32
UPF3A-203ENST00000474056 MORN3Q6PF18 240 aaPredicted RBP13.07□□□□□ -0.32
UPF3A-203ENST00000474056 TMEM14EPQ6UXP3 125 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms