RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 LEMD1Q68G75 181 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 OR1L4Q8NGR5 311 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 SDF2L1Q9HCN8 221 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 LINC00527Q9UJ94 153 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 NDUFB4O95168 129 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 GATA3P23771 443 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 LYZP61626 148 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 PQLC2Q6ZP29 291 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 OR1L6Q8NGR2 347 aa14.12□□□□□ -0.15
VARS2-206ENST00000473916 MXRA5Q9NR99 2828 aa14.11□□□□□ -0.15
VARS2-206ENST00000473916 TAS2R45P59539 299 aa14.11□□□□□ -0.15
VARS2-206ENST00000473916 LRRC75A-AS1Q8N1F1 130 aa14.11□□□□□ -0.15
VARS2-206ENST00000473916 SMCO4Q9NRQ5 59 aa14.11□□□□□ -0.15
VARS2-206ENST00000473916 CCDC168Q8NDH2 2452 aa14.11□□□□□ -0.15
VARS2-206ENST00000473916 PDZD2O15018 2839 aa14.11□□□□□ -0.15
VARS2-206ENST00000473916 UBE2L3P68036 154 aaKnown RBP14.1□□□□□ -0.15
VARS2-206ENST00000473916 ITPR2Q14571 2701 aa14.1□□□□□ -0.15
VARS2-206ENST00000473916 COLCA2A8K830 154 aa14.1□□□□□ -0.15
VARS2-206ENST00000473916 PDE6DO43924 150 aa14.1□□□□□ -0.15
VARS2-206ENST00000473916 HYPMO75409 117 aa14.1□□□□□ -0.15
VARS2-206ENST00000473916 FAM110DQ8TAY7 271 aaPredicted RBP14.1□□□□□ -0.15
VARS2-206ENST00000473916 RNF2Q99496 336 aa14.1□□□□□ -0.15
VARS2-206ENST00000473916 AURKAIP1Q9NWT8 199 aaPredicted RBP14.1□□□□□ -0.15
VARS2-206ENST00000473916 FBXL7Q9UJT9 491 aa14.1□□□□□ -0.15
VARS2-206ENST00000473916 A6NDX4 124 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 PGPEP1LA6NFU8 196 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 GGTLC3B5MD39 225 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 ADIRFQ15847 76 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 C9orf152Q5JTZ5 239 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 TMEM167BQ9NRX6 74 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 NAT8Q9UHE5 227 aa14.09□□□□□ -0.15
VARS2-206ENST00000473916 TRBV20OR9-2A0A075B6H5 130 aa14.08□□□□□ -0.15
VARS2-206ENST00000473916 ELOA3CA0A087WX78 387 aaPredicted RBP14.08□□□□□ -0.15
VARS2-206ENST00000473916 RD3LP0DJH9 198 aa14.08□□□□□ -0.15
VARS2-206ENST00000473916 TMEM241Q24JQ0 296 aa14.08□□□□□ -0.15
VARS2-206ENST00000473916 PAXXQ9BUH6 204 aa14.08□□□□□ -0.15
VARS2-206ENST00000473916 C21orf62Q9NYP8 219 aa14.08□□□□□ -0.15
VARS2-206ENST00000473916 OR2T8A6NH00 312 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 GNG7O60262 68 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 PLP1P60201 277 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 RPL23P62829 140 aaKnown RBP14.08□□□□□ -0.16
VARS2-206ENST00000473916 DEFB112Q30KQ8 113 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 Q56UQ5 140 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 Q6ZS46 218 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 C16orf82Q7Z2V1 217 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 FXYD5Q96DB9 178 aa14.08□□□□□ -0.16
VARS2-206ENST00000473916 TLN2Q9Y4G6 2542 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 F6UZH7 168 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 ATF4P18848 351 aaPredicted RBP14.07□□□□□ -0.16
VARS2-206ENST00000473916 MFAP4P55083 255 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 MS4A10Q96PG2 267 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 OR51M1Q9H341 326 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 OR2C1O95371 312 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 RHOGP84095 191 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 C15orf32Q32M92 178 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 ZNF343Q6P1L6 599 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 FAM24BQ8N5W8 94 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 HIGD1AQ9Y241 93 aa14.07□□□□□ -0.16
VARS2-206ENST00000473916 H3BTX0 84 aa14.06□□□□□ -0.16
VARS2-206ENST00000473916 NDUFS6O75380 124 aaKnown RBP14.06□□□□□ -0.16
VARS2-206ENST00000473916 BLCAPP62952 87 aa14.06□□□□□ -0.16
VARS2-206ENST00000473916 PNRC1Q12796 327 aaPredicted RBP14.06□□□□□ -0.16
VARS2-206ENST00000473916 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
VARS2-206ENST00000473916 WFDC11Q8NEX6 87 aa14.06□□□□□ -0.16
VARS2-206ENST00000473916 MBD6Q96DN6 1003 aa14.06□□□□□ -0.16
VARS2-206ENST00000473916 J3QLI3 93 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 TOMM40O96008 361 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 IGHV4-59P01825 116 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 IL4P05112 153 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 SUMO1P63165 101 aaKnown RBP14.05□□□□□ -0.16
VARS2-206ENST00000473916 RNF212Q495C1 297 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 ZNF491Q8N8L2 437 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 HIST1H2BAQ96A08 127 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 TXNDC17Q9BRA2 123 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 CHRDL1Q9BU40 450 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 SLC25A39Q9BZJ4 359 aaPredicted RBP14.05□□□□□ -0.16
VARS2-206ENST00000473916 THYN1Q9P016 225 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 URGCP-MRPS24S4R325 110 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 A0A087WWC5 75 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 IGHV3-35A0A0C4DH35 117 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 GP9P14770 177 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 CRYBB3P26998 211 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 C19orf54Q5BKX5 351 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 BLNKQ8WV28 456 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 NOL4LQ96MY1 436 aaPredicted RBP14.05□□□□□ -0.16
VARS2-206ENST00000473916 YPEL4Q96NS1 127 aa14.05□□□□□ -0.16
VARS2-206ENST00000473916 MRPL27Q9P0M9 148 aaKnown RBP14.05□□□□□ -0.16
VARS2-206ENST00000473916 FLNAP21333 2647 aaKnown RBP14.05□□□□□ -0.16
VARS2-206ENST00000473916 TRBV9A0A0B4J1U6 114 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 HNF1AP20823 631 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 USF2Q15853 346 aaPredicted RBP14.04□□□□□ -0.16
VARS2-206ENST00000473916 C15orf54Q8N8G6 183 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 C11orf52Q96A22 123 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 RNF125Q96EQ8 232 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 ZNF48Q96MX3 618 aaPredicted RBP14.04□□□□□ -0.16
VARS2-206ENST00000473916 ELOVL1Q9BW60 279 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 UNC79Q9P2D8 2635 aa14.04□□□□□ -0.16
VARS2-206ENST00000473916 IGHV3OR16-8A0A075B7F1 116 aa14.03□□□□□ -0.16
VARS2-206ENST00000473916 TRAV41A0A0B4J266 112 aa14.03□□□□□ -0.16
VARS2-206ENST00000473916 TSPAN9O75954 239 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 322.7 ms