RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 TSPOP30536 169 aa11.89□□□□□ -0.51
LMNA-213ENST00000473598 YPEL3P61236 119 aaPredicted RBP11.89□□□□□ -0.51
LMNA-213ENST00000473598 H2BFWTQ7Z2G1 175 aa11.89□□□□□ -0.51
LMNA-213ENST00000473598 ATP5SQ99766 215 aa11.89□□□□□ -0.51
LMNA-213ENST00000473598 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
LMNA-213ENST00000473598 IGHV1-3A0A0C4DH29 117 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 IGLC7A0M8Q6 106 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 DIRC3C9JPN6 131 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
LMNA-213ENST00000473598 MC5RP33032 325 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 CEACAM3P40198 252 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 UBE2E1P51965 193 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 PET117Q6UWS5 81 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 NIT1Q86X76 327 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 LHX4Q969G2 390 aa11.88□□□□□ -0.51
LMNA-213ENST00000473598 A0A1W2PRD5 423 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 A0A1W2PRF3 423 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 A0A1W2PRM7 423 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 IAPPP10997 89 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
LMNA-213ENST00000473598 PDPNQ86YL7 162 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 LINC01356Q8N9X3 169 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 PINX1Q96BK5 328 aaKnown RBP11.87□□□□□ -0.51
LMNA-213ENST00000473598 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 TEP1Q99973 2627 aaKnown RBP11.87□□□□□ -0.51
LMNA-213ENST00000473598 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.513e-7■■■■□ 22.1
LMNA-213ENST00000473598 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 CORTO00230 105 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 ERVK-16P61578 105 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 RUNX1Q01196 453 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 TMEM267Q0VDI3 215 aaPredicted RBP11.87□□□□□ -0.51
LMNA-213ENST00000473598 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 MINOS1Q5TGZ0 78 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
LMNA-213ENST00000473598 SMPXQ9UHP9 88 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 MINOS1-NBL1R4GNA1 71 aa11.87□□□□□ -0.51
LMNA-213ENST00000473598 A0A0U1RQK1 487 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 A0A1W2PPI3 338 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 PSG1P11464 419 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 CD33P20138 364 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 GATA3P23771 443 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 LGALS4P56470 323 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 LINC00310P59036 64 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 FOXL1Q12952 345 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 Q6ZVH6 145 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 MOB3BQ86TA1 216 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 OR4C13Q8NGP0 309 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 FLYWCH2Q96CP2 140 aaKnown RBP11.86□□□□□ -0.51
LMNA-213ENST00000473598 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 TBL2Q9Y4P3 447 aaKnown RBP11.86□□□□□ -0.51
LMNA-213ENST00000473598 TLN2Q9Y4G6 2542 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 ADMP35318 185 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 MEF2BQ02080 365 aaPredicted RBP11.86□□□□□ -0.51
LMNA-213ENST00000473598 PSG3Q16557 428 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 SMR3AQ99954 134 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 PSMG3Q9BT73 122 aaPredicted RBP11.86□□□□□ -0.51
LMNA-213ENST00000473598 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
LMNA-213ENST00000473598 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
LMNA-213ENST00000473598 IGHV3-72A0A0B4J1Y9 119 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 SRRM4A7MD48 611 aaKnown RBP11.85□□□□□ -0.51
LMNA-213ENST00000473598 SERF1AO75920 110 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 OR9G9P0C7N8 305 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 Q0VG73 95 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 HAPLN4Q86UW8 402 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 SAMD10Q9BYL1 202 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 PARLQ9H300 379 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 FBXL7Q9UJT9 491 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 HILPDAQ9Y5L2 63 aa11.85□□□□□ -0.51
LMNA-213ENST00000473598 TET2Q6N021 2002 aaPredicted RBP11.85□□□□□ -0.51
LMNA-213ENST00000473598 OOSP1A8MZH6 123 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 IFNA5P01569 189 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 OR4A47Q6IF82 309 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 SIGLECL1Q8N7X8 197 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 RPRMQ9NS64 109 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 REG1AP05451 166 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 RPS16P62249 146 aaKnown RBP11.84□□□□□ -0.51
LMNA-213ENST00000473598 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 SPANXN5Q5MJ07 72 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
LMNA-213ENST00000473598 TRAV9-1A0A075B6T8 112 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 TIMM23O14925 209 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 NPFFO15130 113 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 ZNF253O75346 499 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 CRISP2P16562 243 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 HBG1P69891 147 aa11.83□□□□□ -0.52
LMNA-213ENST00000473598 HBG2P69892 147 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms