RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 FABP1P07148 127 aa13.2□□□□□ -0.3
RPUSD3-214ENST00000473522 USF2Q15853 346 aaPredicted RBP13.2□□□□□ -0.3
RPUSD3-214ENST00000473522 TCF24Q7RTU0 167 aa13.2□□□□□ -0.3
RPUSD3-214ENST00000473522 TMEM144Q7Z5S9 345 aa13.2□□□□□ -0.3
RPUSD3-214ENST00000473522 OR51G1Q8NGK1 321 aa13.2□□□□□ -0.3
RPUSD3-214ENST00000473522 TUBA4BQ9H853 241 aa13.2□□□□□ -0.3
RPUSD3-214ENST00000473522 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
RPUSD3-214ENST00000473522 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPUSD3-214ENST00000473522 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
RPUSD3-214ENST00000473522 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 CFDP00746 253 aaPredicted RBP13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 CMC4P56277 68 aaPredicted RBP13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 DLK1P80370 383 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 OR8G2PQ6IF36 304 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 C16orf54Q6UWD8 224 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 ACOT7LQ6ZUV0 252 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 NARS2Q96I59 477 aaKnown RBP13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 GGACTQ9BVM4 153 aa13.18□□□□□ -0.3
RPUSD3-214ENST00000473522 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 BUB3O43684 328 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 DEDDO75618 318 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 CCNKO75909 580 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 PTTG1O95997 202 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 P2RY1P47900 373 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 ARL16Q0P5N6 197 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 RAB32Q13637 225 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 HAGHQ16775 308 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 GRAMD2BQ96HH9 432 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 TM2D3Q9BRN9 247 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 WFDC10AQ9H1F0 79 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 NPVFQ9HCQ7 196 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-214ENST00000473522 HUWE1Q7Z6Z7 4374 aaKnown RBP13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 L7N2F9 121 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 VAMP2P63027 116 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 CYCSP99999 105 aaKnown RBP13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 GLMPQ8WWB7 406 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 CITED4Q96RK1 184 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 NMES1Q9C002 83 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 SRD5A3Q9H8P0 318 aa13.16□□□□□ -0.3
RPUSD3-214ENST00000473522 SIX6O95475 246 aa13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 PFDN2Q9UHV9 154 aa13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 U3KQK5 164 aa13.15□□□□□ -0.3
RPUSD3-214ENST00000473522 HELTA6NFD8 242 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 GOSR2O14653 212 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 AKR1C1Q04828 323 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 OR2F1Q13607 317 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 GBGT1Q8N5D6 347 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 STPG3Q8N7X2 389 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 LYRM2Q9NU23 88 aaPredicted RBP13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
RPUSD3-214ENST00000473522 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 DNASE2O00115 360 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 NUP62P37198 522 aaPredicted RBP13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 TFPI2P48307 235 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 BCAP31P51572 246 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 H2BFSP57053 126 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 RPL11P62913 178 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 TMEM252Q8N6L7 170 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 ZMAT4Q9H898 229 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 UBQLN2Q9UHD9 624 aa13.13□□□□□ -0.31
RPUSD3-214ENST00000473522 K7EQG2 157 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 SSNA1O43805 119 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 GATA2P23769 480 aaPredicted RBP13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 CAV2P51636 162 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 PLP1P60201 277 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 S100A10P60903 97 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 RRAS2P62070 204 aaPredicted RBP13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 SELENOTP62341 195 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 CYP2G1PQ6ZSU1 146 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 BPIFCQ8NFQ6 507 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 MGAT4CQ9UBM8 478 aa13.12□□□□□ -0.31
RPUSD3-214ENST00000473522 LOC102724200A0A096LPH7 203 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 SMCO3A2RU48 225 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 RLN2P04090 185 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 S100A11P31949 105 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 SULT1A1P50225 295 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 LYZP61626 148 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 WFDC3Q8IUB2 231 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 MAP6D1Q9H9H5 199 aa13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
RPUSD3-214ENST00000473522 H0YIZ8 118 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms