RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 TMEM14BQ9NUH8 114 aa6.89□□□□□ -1.31
MCF2L-223ENST00000473345 PLA2G2EQ9NZK7 142 aa6.89□□□□□ -1.31
MCF2L-223ENST00000473345 C3orf85A0A1B0GTC6 90 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 CDS2O95674 445 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 CXCL3P19876 107 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 UCP1P25874 307 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 ERVK-16P61578 105 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 MLANAQ16655 118 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 PHLDA2Q53GA4 152 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 SPINK9Q5DT21 86 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 PVRIGQ6DKI7 326 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 TBC1D26Q86UD7 250 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 OR1P1Q8NH06 330 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 DCANP1Q8TF63 244 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 TMEM56Q96MV1 263 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 TP53RKQ96S44 253 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 TMEM222Q9H0R3 208 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 FKBP11Q9NYL4 201 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 KCNIP3Q9Y2W7 256 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 TMEM56-RWDD3S4R434 201 aa6.88□□□□□ -1.31
MCF2L-223ENST00000473345 DEFB131BA0A096LNP1 70 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 ST8SIA3O43173 380 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 SSNA1O43805 119 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 PFDN1O60925 122 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 CCNKO75909 580 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 OR5AC1P0C628 307 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 ZNF688P0C7X2 276 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 VAMP1P23763 118 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 S100GP29377 79 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 MFAP4P55083 255 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 H2BFSP57053 126 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 DEFB1P60022 68 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 CD300CQ08708 224 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 IL15RAQ13261 267 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 LGALS9BQ3B8N2 356 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 AKAP14Q86UN6 197 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 TCTE3Q8IZS6 198 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 LHFPL5Q8TAF8 219 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 ASB13Q8WXK3 278 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 IL22RA2Q969J5 263 aa6.87□□□□□ -1.31
MCF2L-223ENST00000473345 PUS1Q9Y606 427 aaKnown RBP eCLIP6.87□□□□□ -1.31
MCF2L-223ENST00000473345 DUXBA0A1W2PPF3 345 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 ANXA3P12429 323 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 MIFP14174 115 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 RELQ04864 619 aaPredicted RBP6.86□□□□□ -1.31
MCF2L-223ENST00000473345 SP6Q3SY56 376 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 Q6ZRM9 215 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 STHQ8IWL8 128 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 ZNF114Q8NC26 417 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 COQ8AQ8NI60 647 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 PINX1Q96BK5 328 aaKnown RBP6.86□□□□□ -1.31
MCF2L-223ENST00000473345 SEC22AQ96IW7 307 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 TXN2Q99757 166 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
MCF2L-223ENST00000473345 MGAT4CQ9UBM8 478 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 PRNDQ9UKY0 176 aa6.86□□□□□ -1.31
MCF2L-223ENST00000473345 TRAV2A0A0B4J234 112 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 G3V3Q6 166 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 SNAPC5O75971 98 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 TMEM50AO95807 157 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 GIPP09681 153 aaPredicted RBP6.85□□□□□ -1.31
MCF2L-223ENST00000473345 RAP2BP61225 183 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 SRPXP78539 464 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 TNP2Q05952 138 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 ACTL10Q5JWF8 245 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 SELENOHQ8IZQ5 122 aaKnown RBP6.85□□□□□ -1.31
MCF2L-223ENST00000473345 LGI3Q8N145 548 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 RABAC1Q9UI14 185 aa6.85□□□□□ -1.31
MCF2L-223ENST00000473345 LRP1BQ9NZR2 4599 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 PIGBOS1A0A0B4J2F0 54 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 DNASE2O00115 360 aaPredicted RBP6.84□□□□□ -1.31
MCF2L-223ENST00000473345 GNG7O60262 68 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 ADAP1O75689 374 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 SIX6O95475 246 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 IGKV1-17P01599 117 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 C1QBP02746 253 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 P0C879 139 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 RPL11P62913 178 aaKnown RBP6.84□□□□□ -1.31
MCF2L-223ENST00000473345 PRCDQ00LT1 54 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 TMEM41BQ5BJD5 291 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 NMSQ5H8A3 153 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 ZNF600Q6ZNG1 722 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 LYZL2Q7Z4W2 148 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 SLC35G3Q8N808 338 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 STXBP6Q8NFX7 210 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 RBPMSQ93062 196 aaKnown RBP6.84□□□□□ -1.31
MCF2L-223ENST00000473345 RAB40CQ96S21 281 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 NMES1Q9C002 83 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 TMED3Q9Y3Q3 217 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 U3KQE9 123 aa6.84□□□□□ -1.31
MCF2L-223ENST00000473345 CCSO14618 274 aa6.83□□□□□ -1.32
MCF2L-223ENST00000473345 GOSR2O14653 212 aa6.83□□□□□ -1.32
MCF2L-223ENST00000473345 SCGB2A1O75556 95 aa6.83□□□□□ -1.32
MCF2L-223ENST00000473345 IGKV1-5P01602 117 aa6.83□□□□□ -1.32
MCF2L-223ENST00000473345 P0DMU3 169 aa6.83□□□□□ -1.32
MCF2L-223ENST00000473345 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
MCF2L-223ENST00000473345 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms