RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 LHFPL1Q86WI0 220 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 RNF175Q8N4F7 328 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 MMGT1Q8N4V1 131 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 ZNF721Q8TF20 911 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 RAB2BQ8WUD1 216 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 RTN4IP1Q8WWV3 396 aaPredicted RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 PP6455Q8WZ26 134 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 NUP205Q92621 2012 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 C18orf15Q96N68 181 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 PEBP4Q96S96 227 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 TM2D3Q9BRN9 247 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 TEX15Q9BXT5 2789 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 DHRS4-AS1Q9P1J3 65 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 METTL1Q9UBP6 276 aaKnown RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 CKLFQ9UBR5 152 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 SNX12Q9UMY4 172 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 ATG2BQ96BY7 2078 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 ADAMTS9Q9P2N4 1935 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 COL12A1Q99715 3063 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 PIEZO2Q9H5I5 2752 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 IGKV6D-21A0A0A0MT36 114 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 MEIS3P1A6NDR6 274 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 BBIP1A8MTZ0 92 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 GGTLC3B5MD39 225 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 J3QKU1 62 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 CD5LO43866 347 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 FSTL3O95633 263 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 ZNF705DP0CH99 300 aaPredicted RBP4.41□□□□□ -1.7
RTF1-203ENST00000473214 INAFM2P0DMQ5 153 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 NFYBP25208 207 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 DAPP51397 102 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 KIAA0040Q15053 153 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 FAM78AQ5JUQ0 283 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 AMMECR1LQ6DCA0 310 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 FAM53AQ6NSI3 398 aaPredicted RBP4.41□□□□□ -1.7
RTF1-203ENST00000473214 ZNF767PQ75MW2 155 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 ZNF429Q86V71 674 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 ABCA7Q8IZY2 2146 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 SGMS2Q8NHU3 365 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 TOMM6Q96B49 74 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 C2orf50Q96LR7 162 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 CHCHD5Q9BSY4 110 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 CXCL16Q9H2A7 254 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 OTORQ9NRC9 128 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 PTPRBP23467 1997 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 ACACAQ13085 2346 aa4.41□□□□□ -1.7
RTF1-203ENST00000473214 ARHGEF17Q96PE2 2063 aaPredicted RBP4.41□□□□□ -1.7
RTF1-203ENST00000473214 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.7
RTF1-203ENST00000473214 TNRC6BQ9UPQ9 1833 aaKnown RBP4.4□□□□□ -1.7
RTF1-203ENST00000473214 IGHV3OR16-10A0A075B7F0 116 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 TMEM72A0PK05 275 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 IZUMO1RA6ND01 250 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 TLCD2A6NGC4 264 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 LEUTXA8MZ59 168 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 IGLV2-8P01709 118 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 IGLV3-27P01718 113 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 TRGC2P03986 189 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 MAS1P04201 325 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 ZSCAN5DPP0CG00 497 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 P0DMU3 169 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 FAM231AP0DMU4 169 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 FAM231CP0DMU5 169 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 ATP6V0CP27449 155 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 CASP1P29466 404 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 OPRM1P35372 400 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 INSL3P51460 131 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
RTF1-203ENST00000473214 C2orf66Q6UXQ4 117 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 NRACQ8N912 160 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 ZDHHC22Q8N966 263 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 OR4S1Q8NGB4 309 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 OR2T10Q8NGZ9 312 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 ZNF524Q96C55 264 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 ZC2HC1AQ96GY0 325 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 LYZL4Q96KX0 146 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 TEX37Q96LM6 180 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 SMIM14Q96QK8 99 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 C1QTNF6Q9BXI9 259 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 CTSZQ9UBR2 303 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 V9GYS6 101 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 SPTA1P02549 2419 aa4.4□□□□□ -1.71
RTF1-203ENST00000473214 KIAA1549LQ6ZVL6 1849 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 URB1O60287 2271 aaKnown RBP4.39□□□□□ -1.71
RTF1-203ENST00000473214 HELZP42694 1942 aaKnown RBP4.39□□□□□ -1.71
RTF1-203ENST00000473214 TRAV41A0A0B4J266 112 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 LINC00862A6NCI5 91 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 C9JQL5 133 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ZNF670-ZNF695F2Z2N8 137 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ZNF253O75346 499 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 LINC00869P0C866 280 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 ZNF728P0DKX0 622 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 SDC2P34741 201 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 NDUFA6P56556 154 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 S100A10P60903 97 aa4.39□□□□□ -1.71
RTF1-203ENST00000473214 MEF2BQ02080 365 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms