RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PIGPP57054 158 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 C4orf3Q8WVX3 66 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 PRADC1Q9BSG0 188 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 TMEM133Q9H2Q1 129 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 PARVBQ9HBI1 364 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 ENY2Q9NPA8 101 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 DIDO1Q9BTC0 2240 aaKnown RBP1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 TRAV4A0A0B4J268 109 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 CCDC160A6NGH7 325 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 CNBPP62633 177 aaKnown RBP1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 KRR1Q13601 381 aaKnown RBP1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 TEX261Q6UWH6 196 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 CLECL1Q8IZS7 167 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 SLC30A7Q8NEW0 376 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 OR11H6Q8NGC7 330 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 U3KQ87 197 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 MICAL3Q7RTP6 2002 aa1.18□□□□□ -2.22
PRPF40A-208ENST00000472760 CACNA1BQ00975 2339 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 FAM159BA6NKW6 160 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 TMEM210A6NLX4 147 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 ZNF736B4DX44 427 aaPredicted RBP1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 GADD45GO95257 159 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 SERPINA1P01009 418 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 DYNLT1P63172 113 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 GDF5OSQ5U4N7 250 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 CDC42SE1Q9NRR8 79 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 OPTCQ9UBM4 332 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 DLG5Q8TDM6 1919 aa1.17□□□□□ -2.22
PRPF40A-208ENST00000472760 FMN1Q68DA7 1419 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 ALPK2Q86TB3 2170 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 TRBV19A0A075B6N1 114 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 TRGV10A0A0A0MS01 117 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 M0R2N4 97 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 RNASE4P34096 147 aaKnown RBP1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 OR10X1Q8NGY0 326 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 DGCR14Q96DF8 476 aaKnown RBP1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 YPEL2Q96QA6 119 aa1.16□□□□□ -2.22
PRPF40A-208ENST00000472760 HMGB3O15347 200 aaKnown RBP1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 TIMM17BO60830 172 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 CST2P09228 141 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 ATP5G3P48201 142 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 MRPS25P82663 173 aaKnown RBP1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 PRB3Q04118 309 aaPredicted RBP1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 TMED2Q15363 201 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 RRN3P1Q2M238 152 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 MPV17LQ2QL34 196 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 SOSTDC1Q6X4U4 206 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 STAG3L4Q8TBR4 150 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 CHMP6Q96FZ7 201 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 PHB2Q99623 299 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 C9orf16Q9BUW7 83 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 RP1P56715 2156 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 POLEQ07864 2286 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 RIMBP3CA6NJZ7 1639 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 RIMBP3BA6NNM3 1639 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 RIMBP3Q9UFD9 1639 aa1.15□□□□□ -2.23
PRPF40A-208ENST00000472760 TECTAO75443 2155 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 INE1O15225 51 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 IFNA7P01567 189 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 BCL2L15Q5TBC7 163 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 GOLT1AQ6ZVE7 132 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 PDZD9Q8IXQ8 264 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 OR2T35Q8NGX2 323 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 LINC00467Q9BRT7 94 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 IMUPQ9GZP8 106 aa1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 ZNF106Q9H2Y7 1883 aaKnown RBP1.14□□□□□ -2.23
PRPF40A-208ENST00000472760 PCF11O94913 1555 aaKnown RBP1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 NDUFB3O43676 98 aa1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 CST8O60676 142 aa1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 DHFRP00374 187 aa1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 HSD11B1P28845 292 aa1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 FAM74A1Q5RGS3 127 aa1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 C22orf39Q6P5X5 142 aa1.13□□□□□ -2.23
PRPF40A-208ENST00000472760 TNRC6BQ9UPQ9 1833 aaKnown RBP1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 MED12LQ86YW9 2145 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 CYBAP13498 195 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 ZNF25P17030 456 aaPredicted RBP1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 TAF1AQ15573 450 aaPredicted RBP1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 Q8IYB0 196 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 BORCS5Q969J3 196 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 GPER1Q99527 375 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 TMEM126AQ9H061 195 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 ADGRB2O60241 1585 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 SBF1O95248 1867 aa1.12□□□□□ -2.23
PRPF40A-208ENST00000472760 TAF1LQ8IZX4 1826 aa1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 TAX1BP3O14907 124 aa1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 HSPE1P61604 102 aaKnown RBP1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 MYL5Q02045 173 aa1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 S100A7AQ86SG5 101 aa1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 ST6GALNAC3Q8NDV1 305 aa1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 SLC25A21Q9BQT8 299 aaPredicted RBP1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 ARMC1Q9NVT9 282 aa1.11□□□□□ -2.23
PRPF40A-208ENST00000472760 TCRBV4S1A1TA0A5B7 111 aa1.1□□□□□ -2.23
PRPF40A-208ENST00000472760 A8MWV9 139 aa1.1□□□□□ -2.23
PRPF40A-208ENST00000472760 ATP5HO75947 161 aa1.1□□□□□ -2.23
PRPF40A-208ENST00000472760 DNAL4O96015 105 aa1.1□□□□□ -2.23
PRPF40A-208ENST00000472760 MRPS15P82914 257 aaKnown RBP1.1□□□□□ -2.23
PRPF40A-208ENST00000472760 PLXND1Q9Y4D7 1925 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms