RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 RIMBP3BA6NNM3 1639 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 RIMBP3Q9UFD9 1639 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 C7orf71A4D174 169 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 H0Y980 276 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 H3BRM9 83 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 CALUO43852 315 aaPredicted RBP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 CD3DP04234 171 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 OR5G3P0C626 314 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 S100A4P26447 101 aaKnown RBP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 RPL5P46777 297 aaKnown RBP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 TCL1AP56279 114 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 FXYD6P3P58550 94 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 SKP1P63208 163 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 TMEM86BQ8N661 226 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 ANKRD29Q8N6D5 301 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 OR2T35Q8NGX2 323 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 PLAC4Q8WY50 150 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 ADAT3Q96EY9 351 aaPredicted RBP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 TMEM138Q9NPI0 162 aa-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 WRNQ14191 1432 aaPredicted RBP eCLIP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 NSD1Q96L73 2696 aaPredicted RBP-0.73□□□□□ -2.53
PRPF40A-207ENST00000471701 F8W1H4 67 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 KRTAP6-1Q3LI64 71 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 CLEC6AQ6EIG7 209 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 PXT1Q8NFP0 134 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 OR2T10Q8NGZ9 312 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 SLAMF6Q96DU3 332 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 PPP1R2P1Q96PQ5 205 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 IDI2-AS1Q9NZ38 188 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 UNC79Q9P2D8 2635 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 NEO1Q92859 1461 aa-0.74□□□□□ -2.53
PRPF40A-207ENST00000471701 APOEP02649 317 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 CD14P08571 375 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 CCL4P13236 92 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 HIST1H1TP22492 207 aaPredicted RBP-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 YPEL3P61236 119 aaPredicted RBP-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 DYNLT1P63172 113 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 C2orf82Q6UX34 121 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 Q86TA4 180 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 TP53RKQ96S44 253 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 GPER1Q99527 375 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 HIST1H2BLQ99880 126 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 FGFR1OP2Q9NVK5 253 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 NUP155O75694 1391 aa-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 KDM6AO15550 1401 aaPredicted RBP-0.75□□□□□ -2.53
PRPF40A-207ENST00000471701 MYH10P35580 1976 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 ABCA12Q86UK0 2595 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 TRAV23DV6A0A075B6W5 121 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 A0A087X0T9 212 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 C1orf196B1AJZ1 125 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 PSMD12O00232 456 aaPredicted RBP-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 PPYP01298 95 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 MED21Q13503 144 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 SPATA45Q537H7 98 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 HIST2H3PS2Q5TEC6 136 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 CD200R1LQ6Q8B3 271 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 C20orf196Q8IYI0 205 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 Q8TAT8 98 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 PCTPQ9UKL6 214 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 ARHGEF11O15085 1522 aa-0.76□□□□□ -2.53
PRPF40A-207ENST00000471701 TTC28Q96AY4 2481 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 ROBO3Q96MS0 1386 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 TRAV10A0A0B4J240 114 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 ZNF727A8MUV8 499 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 JMJD7-PLA2G4BH0Y9G9 81 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 CRYZL1O95825 349 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 SPINK1P00995 79 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 SMIM10L2AP0DMW4 78 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 SMIM10L2BP0DMW5 78 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 CASP1P29466 404 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 MAGEA2P43356 314 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 TEN1Q86WV5 123 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 SLC30A7Q8NEW0 376 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 LYSMD1Q96S90 227 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 PTPRFP10586 1907 aa-0.77□□□□□ -2.53
PRPF40A-207ENST00000471701 BCORL1Q5H9F3 1711 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 B4DSR2 109 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 LRRN3E7EW58 273 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 TIMM17BO60830 172 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 ISG15P05161 165 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 OGFRL1Q5TC84 451 aaPredicted RBP-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 SPOPLQ6IQ16 392 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 C10orf99Q6UWK7 81 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 PRR15Q8IV56 129 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 GDPD1Q8N9F7 314 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 PRADC1Q9BSG0 188 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 CYSLTR1Q9Y271 337 aa-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 LSM5Q9Y4Y9 91 aaKnown RBP-0.78□□□□□ -2.53
PRPF40A-207ENST00000471701 KDM6BO15054 1643 aa-0.78□□□□□ -2.54
PRPF40A-207ENST00000471701 KNTC1P50748 2209 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 COX7CP15954 63 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 ANP32AP39687 249 aaKnown RBP-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 ROMO1P60602 79 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 RHOBP62745 196 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 C4orf22Q6V702 233 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 LYG2Q86SG7 212 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 OR5D14Q8NGL3 314 aa-0.79□□□□□ -2.54
PRPF40A-207ENST00000471701 C20orf27Q9GZN8 174 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms