RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 C4BPBP20851 252 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 PRR20EP86478 221 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 PRR20CP86479 221 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 PRR20DP86480 221 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 PRR20BP86481 221 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 PRR20AP86496 221 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 FAM209BQ5JX69 171 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 TOMM20LQ6UXN7 152 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 ZNF600Q6ZNG1 722 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 BAP18Q8IXM2 172 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 STPG3Q8N7X2 389 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 ZNF709Q8N972 641 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 STOML3Q8TAV4 291 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 ST8SIA2Q92186 375 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 DPF1Q92782 380 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 PXMP4Q9Y6I8 212 aa14.72□□□□□ -0.05
PSPC1-203ENST00000471658 RPL29P47914 159 aaKnown RBP14.71□□□□□ -0.05
PSPC1-203ENST00000471658 RPEL1Q2QD12 228 aa14.71□□□□□ -0.05
PSPC1-203ENST00000471658 UNQ9165/PRO28630Q6UXU0 137 aa14.71□□□□□ -0.05
PSPC1-203ENST00000471658 C3orf56Q8N813 242 aa14.71□□□□□ -0.05
PSPC1-203ENST00000471658 Q8WTZ3 238 aa14.71□□□□□ -0.05
PSPC1-203ENST00000471658 PLA2G2EQ9NZK7 142 aa14.71□□□□□ -0.05
PSPC1-203ENST00000471658 CCL24O00175 119 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 CFDP00746 253 aaPredicted RBP14.7□□□□□ -0.06
PSPC1-203ENST00000471658 TPT1P13693 172 aaKnown RBP14.7□□□□□ -0.06
PSPC1-203ENST00000471658 HOXD3P31249 432 aaPredicted RBP14.7□□□□□ -0.06
PSPC1-203ENST00000471658 B2MP61769 119 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 GCSAMLQ5JQS6 135 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 OR51G1Q8NGK1 321 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 VSIRQ9H7M9 311 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 SLC39A9Q9NUM3 307 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 DOK5Q9P104 306 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 WI2-2373I1.2A0A1W2PRP0 233 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 C17orf112F2Z3M2 114 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 SCGB2A1O75556 95 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 IL4P05112 153 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 SPP1P10451 314 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 ELLP55199 621 aaPredicted RBP14.7□□□□□ -0.06
PSPC1-203ENST00000471658 LYZP61626 148 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 SELENOTP62341 195 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 RELQ04864 619 aaPredicted RBP14.7□□□□□ -0.06
PSPC1-203ENST00000471658 FFAR4Q5NUL3 377 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 OR2G3Q8NGZ4 309 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 ZFAND3Q9H8U3 227 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 COL6A5A8TX70 2615 aa14.7□□□□□ -0.06
PSPC1-203ENST00000471658 ZNF320A2RRD8 509 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 ZNF207O43670 478 aaKnown RBP14.69□□□□□ -0.06
PSPC1-203ENST00000471658 ORM2P19652 201 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 SYNJ2BPP57105 145 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 EIF5AP63241 154 aaKnown RBP14.69□□□□□ -0.06
PSPC1-203ENST00000471658 USF2Q15853 346 aaPredicted RBP14.69□□□□□ -0.06
PSPC1-203ENST00000471658 PATE2Q6UY27 113 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 TMED6Q8WW62 240 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 GNPNAT1Q96EK6 184 aaPredicted RBP14.69□□□□□ -0.06
PSPC1-203ENST00000471658 PBDC1Q9BVG4 233 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 TIMM9Q9Y5J7 89 aa14.69□□□□□ -0.06
PSPC1-203ENST00000471658 NDUFA4O00483 81 aa14.68□□□□□ -0.06
PSPC1-203ENST00000471658 TSPAN15O95858 294 aa14.68□□□□□ -0.06
PSPC1-203ENST00000471658 FABP1P07148 127 aa14.68□□□□□ -0.06
PSPC1-203ENST00000471658 FHL3Q13643 280 aa14.68□□□□□ -0.06
PSPC1-203ENST00000471658 KLF5Q13887 457 aaPredicted RBP14.68□□□□□ -0.06
PSPC1-203ENST00000471658 GPHB5Q86YW7 130 aa14.68□□□□□ -0.06
PSPC1-203ENST00000471658 DLX4Q92988 240 aaPredicted RBP14.68□□□□□ -0.06
PSPC1-203ENST00000471658 PSMG3Q9BT73 122 aaPredicted RBP14.68□□□□□ -0.06
PSPC1-203ENST00000471658 C20orf24Q9BUV8 137 aa14.68□□□□□ -0.06
PSPC1-203ENST00000471658 EDN2P20800 178 aa14.67□□□□□ -0.06
PSPC1-203ENST00000471658 ZP3P21754 424 aa14.67□□□□□ -0.06
PSPC1-203ENST00000471658 OR1B1Q8NGR6 318 aa14.67□□□□□ -0.06
PSPC1-203ENST00000471658 RNF125Q96EQ8 232 aa14.67□□□□□ -0.06
PSPC1-203ENST00000471658 RIPPLY3P57055 190 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 FAM106AQ4KMX7 169 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 TMEM37Q8WXS4 190 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 EIF3GO75821 320 aaKnown RBP eCLIP14.66□□□□□ -0.06
PSPC1-203ENST00000471658 SEC11BP0C7V7 166 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 RAB2AP61019 212 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 TM4SF20Q53R12 229 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 ALKAL2Q6UX46 152 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 Q6ZRG5 221 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 TMEM190Q8WZ59 177 aa14.66□□□□□ -0.06
PSPC1-203ENST00000471658 OR5G3P0C626 314 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 MYCNOSP40205 109 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 PLP1P60201 277 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 FAM74A1Q5RGS3 127 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 SHISA2Q6UWI4 295 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 UHRF2Q96PU4 802 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 KCNIP2Q9NS61 270 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 MRPL27Q9P0M9 148 aaKnown RBP14.65□□□□□ -0.06
PSPC1-203ENST00000471658 STAB1Q9NY15 2570 aa14.65□□□□□ -0.06
PSPC1-203ENST00000471658 IGHV3-49A0A0A0MS15 119 aa14.64□□□□□ -0.07
PSPC1-203ENST00000471658 HYPMO75409 117 aa14.64□□□□□ -0.07
PSPC1-203ENST00000471658 APOHP02749 345 aaPredicted RBP14.64□□□□□ -0.07
PSPC1-203ENST00000471658 SERF2P84101 59 aa14.64□□□□□ -0.07
PSPC1-203ENST00000471658 SPATA31B1PQ5VZV4 182 aa14.64□□□□□ -0.07
PSPC1-203ENST00000471658 C1QL4Q86Z23 238 aa14.64□□□□□ -0.07
PSPC1-203ENST00000471658 IGHV3OR16-13A0A075B7E8 117 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 IGHV3-74A0A0B4J1X5 117 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 COX7A2P2O60397 106 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 MORN5Q5VZ52 161 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 DNAJC4Q9NNZ3 241 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 RPRMQ9NS64 109 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms