RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 GFRA4Q9GZZ7 299 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
RRP1B-202ENST00000470886 SMPXQ9UHP9 88 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 MRPS16Q9Y3D3 137 aaKnown RBP8.66□□□□□ -1.02
RRP1B-202ENST00000470886 FAM231BA6NCW3 169 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 FABP5P3A8MUU1 101 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 ATXN7O15265 892 aaPredicted RBP8.66□□□□□ -1.02
RRP1B-202ENST00000470886 WISP1O95388 367 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
RRP1B-202ENST00000470886 SPATA31B1PQ5VZV4 182 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 ZNF502Q8TBZ5 544 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 RNF125Q96EQ8 232 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 JKAMPQ9P055 326 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
RRP1B-202ENST00000470886 C7orf71A4D174 169 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 NBR2O15453 112 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 ZNF726P1Q15940 193 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 BSPH1Q075Z2 132 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 C3orf36Q3SXR2 165 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 ARPC1AQ92747 370 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 CYSLTR1Q9Y271 337 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 DOCK9Q9BZ29 2069 aa8.65□□□□□ -1.02
RRP1B-202ENST00000470886 LILRA1O75019 489 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 GNG5P63218 68 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 FAM53AQ6NSI3 398 aaPredicted RBP8.65□□□□□ -1.03
RRP1B-202ENST00000470886 EBLN2Q6P2I7 272 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 NUP37Q8NFH4 326 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 COPS9Q8WXC6 57 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.03
RRP1B-202ENST00000470886 CACNA1DQ01668 2161 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 F2Z2F3 143 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 IGKV1-39P01597 117 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 IGKV1D-39P04432 117 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 C3orf79P0CE67 100 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 CCL3L1P16619 93 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 TM4SF20Q53R12 229 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 CT83Q5H943 113 aa8.65□□□□□ -1.03
RRP1B-202ENST00000470886 SSBP4Q9BWG4 385 aaPredicted RBP8.65□□□□□ -1.03
RRP1B-202ENST00000470886 CEP290O15078 2479 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 MLNRO43193 412 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 SELLP14151 372 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 HSD52Q0P140 79 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 GAGE2BQ13066 116 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 NPIPB6E9PJ23 425 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 TSPOP30536 169 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 C1orf43Q9BWL3 253 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 FOXH1O75593 365 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 TCRAP04437 139 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 PRSS8Q16651 343 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 PYGO2Q9BRQ0 406 aa8.64□□□□□ -1.03
RRP1B-202ENST00000470886 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 FAM231DQ6ZW35 169 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 TMEM14BQ9NUH8 114 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 ZNF492Q9P255 531 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 FBXL7Q9UJT9 491 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 ASXL3Q9C0F0 2248 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 TOMM40O96008 361 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 VDAC2P45880 294 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 CACNG7P62955 275 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 C5orf24Q7Z6I8 188 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 SLC25A2Q9BXI2 301 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 PHF3Q92576 2039 aaKnown RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 IGKV1D-17A0A075B6S4 117 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 TRAV3A0A0B4J244 114 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 NUP35Q8NFH5 326 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 POLR3KQ9Y2Y1 108 aaPredicted RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 THADAQ6YHU6 1953 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
RRP1B-202ENST00000470886 ATP6V0BQ99437 205 aa8.63□□□□□ -1.03
RRP1B-202ENST00000470886 COL5A1P20908 1838 aaPredicted RBP8.62□□□□□ -1.03
RRP1B-202ENST00000470886 H0YJW9 148 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 CD59P13987 128 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 PAX1P15863 534 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 TMPRSS3P57727 454 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 METRNQ9UJH8 293 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 ASIPP42127 132 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 VWC2Q2TAL6 325 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 ST6GALNAC6Q969X2 333 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 OOSP1A8MZH6 123 aa8.62□□□□□ -1.03
RRP1B-202ENST00000470886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.62□□□□□ -1.03
RRP1B-202ENST00000470886 CFHR2P36980 270 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms