RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 OR10G8Q8NGN5 311 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 TCEAL7Q9BRU2 100 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 FAM103A1Q9BTL3 118 aaKnown RBP13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 GSX1Q9H4S2 264 aaPredicted RBP13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 TRAV30A0A087WSZ9 112 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 PGPEP1LA6NFU8 196 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 TRGC2P03986 189 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 FOXL1Q12952 345 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 DEFB113Q30KQ7 82 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 TIGITQ495A1 244 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 FAM120AOSQ5T036 256 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 RBM14Q96PK6 669 aaKnown RBP13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 ELOVL1Q9BW60 279 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 HIGD1AQ9Y241 93 aa13.37□□□□□ -0.27
SMARCD3-206ENST00000470588 IGLV11-55A0A075B6I3 123 aa13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 CENPVL3A0A0U1RRI6 287 aa13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 IGKV1-17P01599 117 aa13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 RD3LP0DJH9 198 aa13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 GNG4P50150 75 aa13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 FANCD2OSQ96PS1 177 aa13.36□□□□□ -0.27
SMARCD3-206ENST00000470588 B4DSR2 109 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 HLA-DRB1P01911 266 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 MSMBP08118 114 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 AKR1D1P51857 326 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 MFAP4P55083 255 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 TAS2R60P59551 318 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 TEX38Q6PEX7 206 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 THYN1Q9P016 225 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 UTP20O75691 2785 aaKnown RBP13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 PPP5D1E7EU14 171 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 TYMSP04818 313 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 EGR2P11161 476 aaPredicted RBP13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 KRTAP10-9P60411 292 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 NDPQ00604 133 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 FABP9Q0Z7S8 132 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 ZNF329Q86UD4 541 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 PSMG3-AS1Q96PY0 264 aa13.35□□□□□ -0.27
SMARCD3-206ENST00000470588 K7EN84 100 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 TOMM40O96008 361 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 YPEL3P61236 119 aaPredicted RBP13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 LYZP61626 148 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 LINC00518Q8N0U6 118 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 TMEM14CQ9P0S9 112 aa13.34□□□□□ -0.27
SMARCD3-206ENST00000470588 TRAV20A0A0B4J274 112 aa13.33□□□□□ -0.28
SMARCD3-206ENST00000470588 HNF1AP20823 631 aa13.33□□□□□ -0.28
SMARCD3-206ENST00000470588 GATA3P23771 443 aa13.33□□□□□ -0.28
SMARCD3-206ENST00000470588 MYCNOSP40205 109 aa13.33□□□□□ -0.28
SMARCD3-206ENST00000470588 KLF17Q5JT82 389 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-206ENST00000470588 IGHV1-69DA0A0B4J2H0 117 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 A0A1W2PPQ1 181 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 PHOX2AO14813 284 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BKO60814 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BJP06899 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H1BP16401 226 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HOXA5P20719 270 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BOP23527 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BBP33778 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 CNN1P51911 297 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 NDUFA6P56556 154 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BDP58876 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BCP62807 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST2H2BEQ16778 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BHQ93079 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BNQ99877 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 HIST1H2BMQ99879 126 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 SLC25A39Q9BZJ4 359 aaPredicted RBP13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 GCGP01275 180 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 GP9P14770 177 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 KLK9Q2XQG4 91 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 S100A7AQ86SG5 101 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 LINC01356Q8N9X3 169 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 FRZBQ92765 325 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 KLK9Q9UKQ9 250 aa13.32□□□□□ -0.28
SMARCD3-206ENST00000470588 TRAV9-1A0A075B6T8 112 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 WI2-2373I1.2A0A1W2PRP0 233 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 PEX7O00628 323 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 GNG7O60262 68 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 TRGC1P0CF51 173 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 RANP62826 216 aaKnown RBP13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 Q5PR19 223 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 TMEM190Q8WZ59 177 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 IGF2BP2-AS1Q96M15 143 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 TMEM68Q96MH6 324 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 TXN2Q99757 166 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 OSTCQ9NRP0 149 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 C21orf62Q9NYP8 219 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
SMARCD3-206ENST00000470588 EPDR1Q9UM22 224 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms