RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 H0YIZ8 118 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 DLEU1O43261 78 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 IGHV3-11P01762 117 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 ADMP35318 185 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 FAM223AQ8IWN6 122 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 IGKV1-27A0A075B6S5 117 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 A0A1W2PRE2 83 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 H3BUX3 64 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 SLC17A3O00476 420 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 MLNRO43193 412 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 EGR1P18146 543 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 Q5PR19 223 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 C1orf194Q5T5A4 169 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 SCO2A0A1W2PP80 73 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 H7C2G1 150 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 ATP5LO75964 103 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 CFPP27918 469 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 MBD3L1Q8WWY6 194 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 RNF166Q96A37 237 aaPredicted RBP7.82□□□□□ -1.16
UBE3C-205ENST00000470408 DUX3Q96PT4 197 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 WDR83OSQ9Y284 106 aa7.82□□□□□ -1.16
UBE3C-205ENST00000470408 NBASA2RRP1 2371 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 A0A0A6YYD4 124 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 LMO1P25800 156 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 PRR30Q53SZ7 412 aaPredicted RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 GNB1LQ9BYB4 327 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 MBNL3Q9NUK0 354 aaKnown RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 COL8A2P25067 703 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 ZNF56Q15929 161 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 MRPL16Q9NX20 251 aaKnown RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 IGKV1D-17A0A075B6S4 117 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 SPTAN1Q13813 2472 aaKnown RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 CRXO43186 299 aaPredicted RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 IGHV3-48P01763 117 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 AMBPP02760 352 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 SNRPCP09234 159 aaKnown RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 ATP5G3P48201 142 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
UBE3C-205ENST00000470408 PRELID3AQ96N28 172 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 KLHDC3Q9BQ90 382 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 CYTL1Q9NRR1 136 aa7.81□□□□□ -1.16
UBE3C-205ENST00000470408 IGLV3-9A0A075B6K5 115 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TRAV1-1A0A0B4J248 108 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 FABP5P3A8MUU1 101 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 APOHP02749 345 aaPredicted RBP7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TFF3Q07654 80 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 KIR3DL3Q8N743 410 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 LINC01587Q99440 93 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TNFRSF18Q9Y5U5 241 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TRGV11A0A075B6L2 103 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 A0A1B0GWJ7 208 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 SEC11AP67812 179 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 CCL20P78556 96 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TMEM101Q96IK0 257 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 OSTCQ9NRP0 149 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 MRPS16Q9Y3D3 137 aaKnown RBP7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 A0A1B0GUT8 65 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 FNDC10F2Z333 226 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 H0YJW9 148 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 TRGV9Q99603 122 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 ST20Q9HBF5 79 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 FAM215AQ9Y5M1 114 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 CA1P00915 261 aaPredicted RBP7.8□□□□□ -1.16
UBE3C-205ENST00000470408 CGAP01215 116 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 IGHV3-23P01764 117 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 FOXA3P55318 350 aaPredicted RBP7.8□□□□□ -1.16
UBE3C-205ENST00000470408 SRSF4Q08170 494 aaKnown RBP7.8□□□□□ -1.16
UBE3C-205ENST00000470408 C10orf126Q8N4M7 172 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 GFI1Q99684 422 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 DKK4Q9UBT3 224 aa7.8□□□□□ -1.16
UBE3C-205ENST00000470408 MDC1Q14676 2089 aaKnown RBP7.79□□□□□ -1.16
UBE3C-205ENST00000470408 IGHV3OR16-13A0A075B7E8 117 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 IGHV3-74A0A0B4J1X5 117 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 A0A1W2PRX2 142 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 Q9H3A6 140 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 PLXNA2O75051 1894 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 ROS1P08922 2347 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 H3BUT2 72 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 TSPAN13O95857 204 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 COQ2Q96H96 371 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 DMRTA2Q96SC8 542 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 LINC01549A6NIU2 74 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 ST6GALNAC6Q969X2 333 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 C1QTNF4Q9BXJ3 329 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 PCNTO95613 3336 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 CXCL1P09341 107 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 TEX36Q5VZQ5 186 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 DTX2Q86UW9 622 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 FAM19A2Q8N3H0 131 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
UBE3C-205ENST00000470408 SELLP14151 372 aa7.78□□□□□ -1.16
UBE3C-205ENST00000470408 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
UBE3C-205ENST00000470408 MS4A6AQ9H2W1 248 aa7.78□□□□□ -1.16
UBE3C-205ENST00000470408 HEATR1Q9H583 2144 aaKnown RBP7.78□□□□□ -1.16
UBE3C-205ENST00000470408 IGHV1-69DA0A0B4J2H0 117 aa7.78□□□□□ -1.16
UBE3C-205ENST00000470408 PGPEP1LA6NFU8 196 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms