RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CLEC3BP05452 202 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 PSG1P11464 419 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 GATA2P23769 480 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-203ENST00000470339 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 ZNF343Q6P1L6 599 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 OR51G1Q8NGK1 321 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 MYOZ3Q8TDC0 251 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 Q8WTZ3 238 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 CCDC140Q96MF4 163 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 S4R3C0 116 aa11.74□□□□□ -0.53
COL4A5-203ENST00000470339 FN1P02751 2386 aaKnown RBP11.74□□□□□ -0.53
COL4A5-203ENST00000470339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.73□□□□□ -0.53
COL4A5-203ENST00000470339 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 TGOLN2O43493 480 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 HYPMO75409 117 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 OR2C1O95371 312 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 OR5G3P0C626 314 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 CDC34P49427 236 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-203ENST00000470339 DEFA5Q01523 94 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 KIAA0141Q14154 515 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-203ENST00000470339 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 FAM122CQ6P4D5 195 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 SFT2D1Q8WV19 159 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 RAB24Q969Q5 203 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
COL4A5-203ENST00000470339 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
COL4A5-203ENST00000470339 TEP1Q99973 2627 aaKnown RBP11.72□□□□□ -0.53
COL4A5-203ENST00000470339 WI2-2373I1.2A0A1W2PRP0 233 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 IGHV3-23P01764 117 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 GPR183P32249 361 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 ADMP35318 185 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 C10orf113Q5VZT2 155 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 ZNF600Q6ZNG1 722 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 S100A7AQ86SG5 101 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 TMEM37Q8WXS4 190 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 FUT9Q9Y231 359 aa11.72□□□□□ -0.53
COL4A5-203ENST00000470339 RAB19A4D1S5 217 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 MAP1LC3B2A6NCE7 125 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
COL4A5-203ENST00000470339 FAM78BQ5VT40 261 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 PATE2Q6UY27 113 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.53
COL4A5-203ENST00000470339 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 ZNF491Q8N8L2 437 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.53
COL4A5-203ENST00000470339 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 UBE2E2Q96LR5 201 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 MAP1LC3BQ9GZQ8 125 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 SLC25A22Q9H936 323 aa11.71□□□□□ -0.53
COL4A5-203ENST00000470339 STAG3L2P0CL84 134 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 STAG3L3P0CL85 134 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 ORM2P19652 201 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 S100A7P31151 101 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 TAS2R45P59539 299 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 C10orf99Q6UWK7 81 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 LCN15Q6UWW0 184 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 OR4F5Q8NH21 305 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
COL4A5-203ENST00000470339 SEPSECSQ9HD40 501 aaKnown RBP11.7□□□□□ -0.54
COL4A5-203ENST00000470339 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
COL4A5-203ENST00000470339 MRPL27Q9P0M9 148 aaKnown RBP11.7□□□□□ -0.54
COL4A5-203ENST00000470339 CXorf1O96002 111 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
COL4A5-203ENST00000470339 ARL3P36405 182 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 COMMD7Q86VX2 200 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 SLC7A5P1Q8MH63 180 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 LINC01006Q8NI28 216 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
COL4A5-203ENST00000470339 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 HIGD1AQ9Y241 93 aa11.69□□□□□ -0.54
COL4A5-203ENST00000470339 BMPR1BO00238 502 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 IL4P05112 153 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 C8orf88P0DMB2 117 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 CDX1P47902 265 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-203ENST00000470339 PSMB3P49720 205 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 PPT1P50897 306 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 LYZP61626 148 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 KHDC3LQ587J8 217 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 LINC00305Q7Z4B0 112 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 STXBP6Q8NFX7 210 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 ZNF414Q96IQ9 312 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 DOK5Q9P104 306 aa11.68□□□□□ -0.54
COL4A5-203ENST00000470339 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL4A5-203ENST00000470339 GGCTO75223 188 aaKnown RBP11.67□□□□□ -0.54
COL4A5-203ENST00000470339 IGHV3-11P01762 117 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 LGALS1P09382 135 aaKnown RBP11.67□□□□□ -0.54
COL4A5-203ENST00000470339 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
COL4A5-203ENST00000470339 CCL20P78556 96 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms