RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 UNQ5815/PRO19632Q6UWF5 114 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 HAPLN4Q86UW8 402 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 OR5T1Q8NG75 326 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 LINC01006Q8NI28 216 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 STOML3Q8TAV4 291 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM68Q96MH6 324 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 OR4C12Q96R67 309 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 P2RX4Q99571 388 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 PRSS22Q9GZN4 317 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 PLEKHA3Q9HB20 300 aa3.68□□□□□ -1.82
SF3B1-208ENST00000470268 TET2Q6N021 2002 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 TRAV41A0A0B4J266 112 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 A0A1W2PN81 502 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF705EA8MWA4 302 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 LINC00587B1AMM8 73 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 KRBOX1C9JBD0 128 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 PRSS46E5RG02 174 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 PRYO14603 147 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 PET100P0DJ07 73 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 CHRNA7P36544 502 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 RPP30P78346 268 aaKnown RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 SPANXN5Q5MJ07 72 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 PVRIGQ6DKI7 326 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM14EPQ6UXP3 125 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 TTC9CQ8N5M4 171 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 OR5C1Q8NGR4 320 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 WIPF2Q8TF74 440 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 SMIM8Q96KF7 97 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 RAB40CQ96S21 281 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 KLK15Q9H2R5 256 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 HRH4Q9H3N8 390 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 PSENENQ9NZ42 101 aa3.67□□□□□ -1.82
SF3B1-208ENST00000470268 F11RQ9Y624 299 aaKnown RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 FBN1P35555 2871 aaKnown RBP3.67□□□□□ -1.82
SF3B1-208ENST00000470268 NPIPB5A8MRT5 1133 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 C9JQL5 133 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 DNASE2O00115 360 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 MED6O75586 246 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 IFNA10P01566 189 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 IGHV3-48P01763 117 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 METTL15P1P0C7V9 234 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 MDKP21741 143 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 TAGLN2P37802 199 aaKnown RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 P2RY1P47900 373 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 MEOX2P50222 304 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ERHP84090 104 aaKnown RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 C2orf83Q53S99 150 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 TCTEX1D4Q5JR98 221 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ATRAIDQ6UW56 229 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF114Q8NC26 417 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 BPIFCQ8NFQ6 507 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 OR2T6Q8NHC8 308 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 FAM110DQ8TAY7 271 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 MS4A10Q96PG2 267 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 SRSF8Q9BRL6 282 aaKnown RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 SPXQ9BT56 116 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 HIPK2Q9H2X6 1198 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 C16orf95Q9H693 158 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 FNDC4Q9H6D8 234 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 LYRM2Q9NU23 88 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 MRPL36Q9P0J6 103 aaKnown RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 IGLV11-55A0A075B6I3 123 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 TRBV9A0A0B4J1U6 114 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 IGHV3-21A0A0B4J1V1 117 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ZNF320A2RRD8 509 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 NDUFA7O95182 113 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 IGHG4P01861 327 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 CRYBA1P05813 215 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ADCYAP1P18509 176 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 NPY1RP25929 384 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 PSMB8P28062 276 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 SNCAP37840 140 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 PROK1P58294 105 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 TAS2R30P59541 319 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 KRTAP10-3P60369 221 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 KIAA0141Q14154 515 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 KLK9Q2XQG4 91 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 KRTAP24-1Q3LI83 254 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 SLC25A24Q6NUK1 477 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 TMEM182Q6ZP80 229 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 HSD17B13Q7Z5P4 300 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 OR1P1Q8NH06 330 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 CIB3Q96Q77 187 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 VSIRQ9H7M9 311 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ENY2Q9NPA8 101 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 ZFP57Q9NU63 452 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 MED9Q9NWA0 146 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 CACFD1Q9UGQ2 172 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 KLK9Q9UKQ9 250 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 STRAPQ9Y3F4 350 aaKnown RBP3.66□□□□□ -1.82
SF3B1-208ENST00000470268 S4R3C0 116 aa3.66□□□□□ -1.82
SF3B1-208ENST00000470268 PSMB11A5LHX3 300 aa3.65□□□□□ -1.82
SF3B1-208ENST00000470268 FAM74A7A6NL05 159 aa3.65□□□□□ -1.82
SF3B1-208ENST00000470268 I3L2K1 104 aa3.65□□□□□ -1.82
SF3B1-208ENST00000470268 K7EIM0 57 aa3.65□□□□□ -1.82
SF3B1-208ENST00000470268 UBE2CO00762 179 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms