RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TTC37Q6PGP7 1564 aa2.56□□□□□ -2
COL11A1-208ENST00000470170 RAPGEF6Q8TEU7 1601 aa2.56□□□□□ -2
COL11A1-208ENST00000470170 XIRP1Q702N8 1843 aaKnown RBP2.56□□□□□ -2
COL11A1-208ENST00000470170 MYO5BQ9ULV0 1848 aa2.56□□□□□ -2
COL11A1-208ENST00000470170 MIA3Q5JRA6 1907 aa2.56□□□□□ -2
COL11A1-208ENST00000470170 SCN10AQ9Y5Y9 1956 aa2.56□□□□□ -2
COL11A1-208ENST00000470170 A0A087X0T9 212 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 IGHV3-21A0A0B4J1V1 117 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 PNMA8CA0A1B0GUJ8 204 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 OR2T8A6NH00 312 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 ZNF860A6NHJ4 632 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 COLCA2A8K830 154 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 A8MWP6 167 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 LY6LH3BQJ8 138 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 C19orf84I3L1E1 186 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 UBFD1O14562 309 aaKnown RBP2.55□□□□□ -2
COL11A1-208ENST00000470170 KRASP01116 189 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 IGKV1-5P01602 117 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 PTHLHP12272 177 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 HIST1H4AP62805 103 aaKnown RBP2.55□□□□□ -2
COL11A1-208ENST00000470170 UBE2BP63146 152 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 HBBP68871 147 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 MEF2BQ02080 365 aaPredicted RBP2.55□□□□□ -2
COL11A1-208ENST00000470170 AKR1C1Q04828 323 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 GRIN2AQ12879 1464 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 ZNF141Q15928 474 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 CCSMST1Q4G0I0 132 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 LUZP6Q538Z0 58 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 HSD17B12Q53GQ0 312 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 SPATA31E1Q6ZUB1 1445 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 OR10AC1Q8NH08 325 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 BRK1Q8WUW1 75 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 MAL2Q969L2 176 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 TSSK6Q9BXA6 273 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 TMEM133Q9H2Q1 129 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 RNF11Q9Y3C5 154 aa2.55□□□□□ -2
COL11A1-208ENST00000470170 TNS2Q63HR2 1409 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 TRAPPC8Q9Y2L5 1435 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 IGLV2-18A0A075B6J9 118 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 TRAV27A0A087WT01 109 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 TRGV10A0A0A0MS01 117 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 IGKV1D-43A0A0B4J1Z2 117 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 IGKV1-12A0A0C4DH73 117 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 ODAMA1E959 279 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 PGLYRP1O75594 196 aaPredicted RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 NDUFB2O95178 105 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 IGKV1D-12P01611 117 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 IGLV3-25P01717 112 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 C1QAP02745 245 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 NPPCP23582 126 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 ZNF93P35789 620 aaPredicted RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 RPL27AP46776 148 aaKnown RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 FOXA3P55318 350 aaPredicted RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 FXYD7P58549 80 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 TPPP2P59282 170 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 LSM3P62310 102 aaKnown RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 BTG2P78543 158 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 QRFPP83859 136 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 MYL5Q02045 173 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 RPL18Q07020 188 aaKnown RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 ZNF678Q5SXM1 525 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 FAM104BQ5XKR9 115 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 LCN15Q6UWW0 184 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 PHF5AQ7RTV0 110 aaKnown RBP2.54□□□□□ -2
COL11A1-208ENST00000470170 SNX29P2Q8IUI4 249 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 PCP2Q8IVA1 136 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 AMN1Q8IY45 258 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 OR5H6Q8NGV6 325 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 DCANP1Q8TF63 244 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 B9D2Q9BPU9 175 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 MIEN1Q9BRT3 115 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 BANF2Q9H503 90 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 ZNF586Q9NXT0 402 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 SNX12Q9UMY4 172 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 PHLDA3Q9Y5J5 127 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 MPC1Q9Y5U8 109 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 IER3IP1Q9Y5U9 82 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 V9GYS6 101 aa2.54□□□□□ -2
COL11A1-208ENST00000470170 CACNA1AO00555 2505 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 KIAA0556O60303 1618 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 KIF21BO75037 1637 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 NHSL1Q5SYE7 1610 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 URB2Q14146 1524 aaKnown RBP2.53□□□□□ -2
COL11A1-208ENST00000470170 KIAA0586Q9BVV6 1533 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 BCL9LQ86UU0 1499 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 RAPGEF2Q9Y4G8 1499 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 IGHV1-3A0A0C4DH29 117 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 TRBV27A0A0K0K1C4 114 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 LOC100130705A0A1B0GUX0 176 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 A0A1W2PP18 115 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 TMEM256-PLSCR3K7ERE1 68 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 HIST1H2BKO60814 126 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 SOD1P00441 154 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 HLA-DQA1P01909 254 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 HIST1H2BJP06899 126 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 CRHBPP24387 322 aa2.53□□□□□ -2
COL11A1-208ENST00000470170 CMC4P56277 68 aaPredicted RBP2.53□□□□□ -2
COL11A1-208ENST00000470170 RHOGP84095 191 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms