RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 TRIQKQ629K1 86 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 IGFL4Q6B9Z1 124 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 LGI3Q8N145 548 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 RPP25LQ8N5L8 163 aaKnown RBP6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 SLC24A4Q8NFF2 622 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 OR11H2Q8NH07 326 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 DTD1Q8TEA8 209 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 IL22RA2Q969J5 263 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 RAB40CQ96S21 281 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 SLC25A21Q9BQT8 299 aaPredicted RBP6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 SHPKQ9UHJ6 478 aa6.7□□□□□ -1.34
SHROOM3-203ENST00000469923 HERC2O95714 4834 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 DEDDO75618 318 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 NDUFB6O95139 128 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 CA1P00915 261 aaPredicted RBP6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 IL4P05112 153 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 ANXA3P12429 323 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 ANXA7P20073 488 aaKnown RBP6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 BMI1P35226 326 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 DHRS2Q13268 280 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 ACTL10Q5JWF8 245 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 GGNBP1Q5YKI7 109 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 CEMP1Q6PRD7 247 aaPredicted RBP6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 CENPSQ8N2Z9 138 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 OR1S1Q8NH92 325 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 C20orf173Q96LM9 149 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 RARRES2Q99969 163 aa6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 PAIP2BQ9ULR5 123 aaKnown RBP6.69□□□□□ -1.34
SHROOM3-203ENST00000469923 KIR2DL5BA0A0G2JN68 375 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 KIR2DL5BA0A0G2JPC4 375 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 C9orf170A2RU37 121 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 NAP1L6A6NFF2 107 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 PRSS46E5RG02 174 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 F6UB75 175 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 H3BP45 60 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 WRBO00258 174 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 BUB3O43684 328 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 LY6G6CO95867 125 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 IFNA4P05014 189 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 RD3LP0DJH9 198 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 APOC4P55056 127 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 PAX9P55771 341 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 YPEL3P61236 119 aaPredicted RBP6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 TRPT1Q86TN4 253 aaKnown RBP6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 KIR2DL5AQ8N109 375 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 LRTM2Q8N967 370 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 CSNK1G2-AS1Q8NCQ2 148 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 KIR2DL5BQ8NHK3 375 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 Q8WTZ3 238 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 METTL26Q96S19 204 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 X6R8D5 127 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
SHROOM3-203ENST00000469923 FAM90A26D6RGX4 464 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 UBE2CO00762 179 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 HNRNPCP07910 306 aaKnown RBP eCLIP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 SNRPCP09234 159 aaKnown RBP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 OR4E1P0C645 316 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 ZNF705DP0CH99 300 aaPredicted RBP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 ZNF705BP0CI00 300 aaPredicted RBP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 POLR2GP62487 172 aaKnown RBP eCLIP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 ARL16Q0P5N6 197 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 Q8NAQ8 132 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 OR1S2Q8NGQ3 325 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 RNASEH2CQ8TDP1 164 aaKnown RBP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 PHLDA1Q8WV24 401 aaPredicted RBP6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 DEDD2Q8WXF8 326 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 GINS3Q9BRX5 216 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 PBDC1Q9BVG4 233 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 XCL2Q9UBD3 114 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 FBXL17Q9UF56 701 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 CELA1Q9UNI1 258 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 TP53TG1Q9Y2A0 90 aa6.67□□□□□ -1.34
SHROOM3-203ENST00000469923 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 IGHV4-28A0A0C4DH34 117 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 CENPXA8MT69 81 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 LYRM1O43325 122 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 TOMM40O96008 361 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 HLA-DMBP28068 263 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 PAFAH1B2P68402 229 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
SHROOM3-203ENST00000469923 TRAV6A0A075B6T7 132 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 DUXBA0A1W2PPF3 345 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 PMS2P5A8MQ11 134 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 H3BMM0 161 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 CORTO00230 105 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 CCSO14618 274 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 UPK1BO75841 260 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 TCRBP04435 133 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 SLC25A4P12235 298 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 GPX4P36969 197 aaPredicted RBP6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 LYZP61626 148 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 SRPXP78539 464 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 IFITM3Q01628 133 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 SPANXN5Q5MJ07 72 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 STHQ8IWL8 128 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 RNF125Q96EQ8 232 aa6.65□□□□□ -1.34
SHROOM3-203ENST00000469923 LINC00052Q96N35 136 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms