RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 ZFP92A6NM28 416 aa13.44□□□□□ -0.26
PHGDH-204ENST00000469443 BTCP35070 178 aa13.44□□□□□ -0.26
PHGDH-204ENST00000469443 LYG2Q86SG7 212 aa13.44□□□□□ -0.26
PHGDH-204ENST00000469443 OR51G1Q8NGK1 321 aa13.44□□□□□ -0.26
PHGDH-204ENST00000469443 DCANP1Q8TF63 244 aa13.44□□□□□ -0.26
PHGDH-204ENST00000469443 MAGT1Q9H0U3 335 aa13.44□□□□□ -0.26
PHGDH-204ENST00000469443 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
PHGDH-204ENST00000469443 IGKV1D-37A0A075B6S9 117 aa13.43□□□□□ -0.26
PHGDH-204ENST00000469443 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
PHGDH-204ENST00000469443 OR4E1P0C645 316 aa13.43□□□□□ -0.26
PHGDH-204ENST00000469443 AP2S1P53680 142 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-204ENST00000469443 RPP30P78346 268 aaKnown RBP13.43□□□□□ -0.26
PHGDH-204ENST00000469443 DHRS2Q13268 280 aa13.43□□□□□ -0.26
PHGDH-204ENST00000469443 COQ8AQ8NI60 647 aa13.43□□□□□ -0.26
PHGDH-204ENST00000469443 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
PHGDH-204ENST00000469443 WRBO00258 174 aa13.42□□□□□ -0.26
PHGDH-204ENST00000469443 BUB3O43684 328 aa13.42□□□□□ -0.26
PHGDH-204ENST00000469443 ADAP1O75689 374 aa13.42□□□□□ -0.26
PHGDH-204ENST00000469443 ZNF688P0C7X2 276 aa13.42□□□□□ -0.26
PHGDH-204ENST00000469443 GATAD1Q8WUU5 269 aa13.42□□□□□ -0.26
PHGDH-204ENST00000469443 RYR2Q92736 4967 aa13.41□□□□□ -0.26
PHGDH-204ENST00000469443 FABP1P07148 127 aa13.41□□□□□ -0.26
PHGDH-204ENST00000469443 ANXA7P20073 488 aaKnown RBP13.41□□□□□ -0.26
PHGDH-204ENST00000469443 NUP62P37198 522 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-204ENST00000469443 ZNF90Q03938 601 aa13.41□□□□□ -0.26
PHGDH-204ENST00000469443 CNPY1Q3B7I2 92 aa13.41□□□□□ -0.26
PHGDH-204ENST00000469443 C4orf46Q504U0 113 aa13.41□□□□□ -0.26
PHGDH-204ENST00000469443 STHQ8IWL8 128 aa13.41□□□□□ -0.26
PHGDH-204ENST00000469443 CA1P00915 261 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-204ENST00000469443 IFNA21P01568 189 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 ID3Q02535 119 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 SPANXN5Q5MJ07 72 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 OR8G2PQ6IF36 304 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 SIGLEC15Q6ZMC9 328 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 TRGV9Q99603 122 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 PBDC1Q9BVG4 233 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 PFDN2Q9UHV9 154 aa13.4□□□□□ -0.26
PHGDH-204ENST00000469443 PRSS46E5RG02 174 aa13.39□□□□□ -0.27
PHGDH-204ENST00000469443 PLA2G10O15496 165 aa13.39□□□□□ -0.27
PHGDH-204ENST00000469443 ATF4P18848 351 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-204ENST00000469443 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.27
PHGDH-204ENST00000469443 THAP8Q8NA92 274 aa13.39□□□□□ -0.27
PHGDH-204ENST00000469443 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
PHGDH-204ENST00000469443 STRAPQ9Y3F4 350 aaKnown RBP13.39□□□□□ -0.27
PHGDH-204ENST00000469443 IGKV1OR2-108A0A075B7D4 117 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 SNRPGP15A8MWD9 76 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 H3BP45 60 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 LYRM1O43325 122 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 NKX2-1P43699 371 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-204ENST00000469443 LYZP61626 148 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 POLR2GP62487 172 aaKnown RBP eCLIP13.38□□□□□ -0.27
PHGDH-204ENST00000469443 OR2F1Q13607 317 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 TRPT1Q86TN4 253 aaKnown RBP13.38□□□□□ -0.27
PHGDH-204ENST00000469443 TMEM217Q8N7C4 229 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 RARRES2Q99969 163 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 SEPSECSQ9HD40 501 aaKnown RBP13.38□□□□□ -0.27
PHGDH-204ENST00000469443 PLECQ15149 4684 aaKnown RBP13.38□□□□□ -0.27
PHGDH-204ENST00000469443 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
PHGDH-204ENST00000469443 KNCNA6PVL3 124 aa13.37□□□□□ -0.27
PHGDH-204ENST00000469443 JTBO76095 146 aa13.37□□□□□ -0.27
PHGDH-204ENST00000469443 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
PHGDH-204ENST00000469443 OR11H2Q8NH07 326 aa13.37□□□□□ -0.27
PHGDH-204ENST00000469443 C20orf85Q9H1P6 137 aa13.37□□□□□ -0.27
PHGDH-204ENST00000469443 CXorf65A6NEN9 183 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 CFDP00746 253 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-204ENST00000469443 SPP1P10451 314 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 SNRPD3P62318 126 aaKnown RBP13.36□□□□□ -0.27
PHGDH-204ENST00000469443 PMS2P11Q13670 270 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 ACTL10Q5JWF8 245 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 MORN3Q6PF18 240 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-204ENST00000469443 MITD1Q8WV92 249 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 PSENENQ9NZ42 101 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 FBXL17Q9UF56 701 aa13.36□□□□□ -0.27
PHGDH-204ENST00000469443 IAH1Q2TAA2 248 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-204ENST00000469443 TMEM41BQ5BJD5 291 aa13.35□□□□□ -0.27
PHGDH-204ENST00000469443 C1orf194Q5T5A4 169 aa13.35□□□□□ -0.27
PHGDH-204ENST00000469443 ACOT7LQ6ZUV0 252 aa13.35□□□□□ -0.27
PHGDH-204ENST00000469443 SMIM8Q96KF7 97 aa13.35□□□□□ -0.27
PHGDH-204ENST00000469443 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
PHGDH-204ENST00000469443 CCDC32Q9BV29 185 aa13.35□□□□□ -0.27
PHGDH-204ENST00000469443 SSSCA1O60232 199 aa13.34□□□□□ -0.27
PHGDH-204ENST00000469443 TCRBP04435 133 aa13.34□□□□□ -0.27
PHGDH-204ENST00000469443 GIG44P09565 113 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-204ENST00000469443 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
PHGDH-204ENST00000469443 LINC00299Q6ZSB3 139 aa13.34□□□□□ -0.27
PHGDH-204ENST00000469443 ZBTB8BQ8NAP8 495 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-204ENST00000469443 PPP1R14BQ96C90 147 aa13.34□□□□□ -0.27
PHGDH-204ENST00000469443 C11orf68Q9H3H3 251 aaKnown RBP13.34□□□□□ -0.27
PHGDH-204ENST00000469443 ALMS1Q8TCU4 4167 aa13.33□□□□□ -0.28
PHGDH-204ENST00000469443 NUPR2A6NF83 97 aa13.33□□□□□ -0.28
PHGDH-204ENST00000469443 SCGB1D2O95969 90 aa13.33□□□□□ -0.28
PHGDH-204ENST00000469443 C4BPBP20851 252 aa13.33□□□□□ -0.28
PHGDH-204ENST00000469443 TMEM144Q7Z5S9 345 aa13.33□□□□□ -0.28
PHGDH-204ENST00000469443 BPIFCQ8NFQ6 507 aa13.33□□□□□ -0.28
PHGDH-204ENST00000469443 TRAV6A0A075B6T7 132 aa13.32□□□□□ -0.28
PHGDH-204ENST00000469443 PMS2P5A8MQ11 134 aa13.32□□□□□ -0.28
PHGDH-204ENST00000469443 PAX9P55771 341 aa13.32□□□□□ -0.28
PHGDH-204ENST00000469443 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
PHGDH-204ENST00000469443 SLC45A2Q9UMX9 530 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms