RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 C5orf64Q2M2E5 130 aa12.4□□□□□ -0.43
LIMS2-213ENST00000469300 OR10AG1Q8NH19 301 aa12.4□□□□□ -0.43
LIMS2-213ENST00000469300 COL8A2P25067 703 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 BPESC1Q9GZL8 116 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 BUB1B-PAK6H3BSN5 160 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 JKAMPQ9P055 326 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 COLCA2A8K830 154 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 CBLN1P23435 193 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 MIR17HGQ75NE6 70 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 LOC389332A0A1B0GUA5 103 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 IGLV1-44P01699 117 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 LMO1P25800 156 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 HBBP68871 147 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 PAX8Q06710 450 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 ZNF841Q6ZN19 808 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 ITLN2Q8WWU7 325 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-213ENST00000469300 ASCL2Q99929 193 aa12.39□□□□□ -0.43
LIMS2-213ENST00000469300 SCN8AQ9UQD0 1980 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 HIST1H2BLQ99880 126 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
LIMS2-213ENST00000469300 Q9H3A6 140 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 RNF144BQ7Z419 303 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 OR1N2Q8NGR9 330 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 CREBBPQ92793 2442 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 KCNS1Q96KK3 526 aa12.38□□□□□ -0.43
LIMS2-213ENST00000469300 TRAV9-1A0A075B6T8 112 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 PSMB11A5LHX3 300 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 IGKV3-20P01619 116 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 PRB3Q04118 309 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-213ENST00000469300 SGK494Q96LW2 274 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 TECTAO75443 2155 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 H0YJW9 148 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 H3BUX3 64 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 ZNF56Q15929 161 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 ZNF502Q8TBZ5 544 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 MBNL3Q9NUK0 354 aaKnown RBP12.37□□□□□ -0.43
LIMS2-213ENST00000469300 ABCA1O95477 2261 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 CFHR2P36980 270 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 CADP27708 2225 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 IGHV3-66A0A0C4DH42 116 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 CA1P00915 261 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-213ENST00000469300 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
LIMS2-213ENST00000469300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.43
LIMS2-213ENST00000469300 GATA2P23769 480 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-213ENST00000469300 NMSQ5H8A3 153 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 NEUROG1Q92886 237 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 C5orf30Q96GV9 206 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 SLX1AQ9BQ83 275 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 H0YIZ8 118 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 C1QL4Q86Z23 238 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 USMG5Q96IX5 58 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 FGF16O43320 207 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
LIMS2-213ENST00000469300 MSMBP08118 114 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 CD55P08174 381 aa12.36□□□□□ -0.43
LIMS2-213ENST00000469300 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 FABP5P3A8MUU1 101 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 CENPFP49454 3210 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 A0A1B0GWJ7 208 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 LEPP41159 167 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 C10orf126Q8N4M7 172 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 SDF2L1Q9HCN8 221 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 IGLV3-9A0A075B6K5 115 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 A0A1W2PRX2 142 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 SUPT4H1P63272 117 aaKnown RBP12.35□□□□□ -0.43
LIMS2-213ENST00000469300 CCL20P78556 96 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 KLRD1Q13241 179 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 PYY3Q5JQD4 70 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 BIVMQ86UB2 503 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 OR5A1Q8NGJ0 315 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 RNF138Q8WVD3 245 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 IL36BQ9NZH7 164 aa12.35□□□□□ -0.43
LIMS2-213ENST00000469300 WISP1O95388 367 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 LYPD2Q6UXB3 125 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 UBE2E1P51965 193 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 PLXND1Q9Y4D7 1925 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 OVOL1O14753 267 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 ANAPC13Q9BS18 74 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
LIMS2-213ENST00000469300 TRBV20OR9-2A0A075B6H5 130 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 C15orf32Q32M92 178 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 TTC9CQ8N5M4 171 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 TRGV9Q99603 122 aa12.34□□□□□ -0.43
LIMS2-213ENST00000469300 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 MRPL52Q86TS9 123 aaKnown RBP12.33□□□□□ -0.44
LIMS2-213ENST00000469300 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 H3BUT2 72 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
LIMS2-213ENST00000469300 STHQ8IWL8 128 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms