RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SCRT2Q9NQ03 307 aa8.2□□□□□ -1.1
NUP50-214ENST00000469163 DCHS2Q6V1P9 2916 aa8.2□□□□□ -1.1
NUP50-214ENST00000469163 TNRC6BQ9UPQ9 1833 aaKnown RBP8.19□□□□□ -1.1
NUP50-214ENST00000469163 A0A1W2PRD5 423 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 A0A1W2PRF3 423 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 A0A1W2PRM7 423 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 LYNX1G3V0Z9 82 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 H3BMG7 143 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 LYNX1P0DP58 116 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 FAM27BQ5VT28 67 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 OR4A16Q8NH70 328 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 NRGNQ92686 78 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 NCKAP5O14513 1909 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 FOXI3A8MTJ6 420 aaPredicted RBP8.19□□□□□ -1.1
NUP50-214ENST00000469163 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 F8W1H4 67 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 K7ENP7 123 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 ZNF695Q8IW36 515 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 IL36BQ9NZH7 164 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 CD300LBA8K4G0 201 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 MMD2Q8IY49 270 aa8.19□□□□□ -1.1
NUP50-214ENST00000469163 WNT9BO14905 357 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 ENSAO43768 121 aaKnown RBP8.18□□□□□ -1.1
NUP50-214ENST00000469163 CGAP01215 116 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 TMEM42Q69YG0 159 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 OR4C12Q96R67 309 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
NUP50-214ENST00000469163 DHRS3O75911 302 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 HLA-DRB1P01911 266 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 C1orf100Q5SVJ3 147 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 DUX5Q96PT3 197 aa8.18□□□□□ -1.1
NUP50-214ENST00000469163 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 F5H768 121 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 TMEM50AO95807 157 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 MT-ND6P03923 174 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 GNLYP22749 145 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 NPPCP23582 126 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 AMTNQ6UX39 209 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 H1FXQ92522 213 aaKnown RBP8.17□□□□□ -1.1
NUP50-214ENST00000469163 SFXN3Q9BWM7 321 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 GNB1LQ9BYB4 327 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 IGHV3-43A0A0B4J1X8 118 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 C2orf70A6NJV1 201 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 CXorf1O96002 111 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 IGHV3-43DP0DP04 118 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 MPV17P39210 176 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 FAM159AQ6UWV7 190 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
NUP50-214ENST00000469163 LYZL4Q96KX0 146 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
NUP50-214ENST00000469163 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 RABAC1Q9UI14 185 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 SOX21Q9Y651 276 aaPredicted RBP8.17□□□□□ -1.1
NUP50-214ENST00000469163 ARHGAP32A7KAX9 2087 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 IGLV3-32A0A0A0MS00 114 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 LOC107984640A0A0U1RRK4 108 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 APCSP02743 223 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 IFI6P09912 130 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 CECR9P0C854 216 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 TMEM50BP56557 158 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 SLC25A53Q5H9E4 307 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 Q6AWC8 147 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
NUP50-214ENST00000469163 A0A0A6YYD4 124 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 TRBV9A0A0B4J1U6 114 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 hADV38S2A0JD32 116 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
NUP50-214ENST00000469163 DEFA4P12838 97 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 KLRD1Q13241 179 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 GAGE13Q4V321 117 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 Q6ZS92 163 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 C22orf34Q6ZV56 151 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 NABP1Q96AH0 204 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 KIR2DL4Q99706 377 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 MS4A6AQ9H2W1 248 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 IGKV1D-8A0A087WSZ0 117 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 TRAV5A0A0B4J249 113 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 A0A0G2JNJ9 132 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 TMPRSS2O15393 492 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 GCSHP23434 173 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 ECI1P42126 302 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 ATP5G3P48201 142 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 LGALS4P56470 323 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 GNB1P62873 340 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 Q9UFV3 132 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 LINC00312Q9Y6C7 94 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 UBE2L5PA0A1B0GUS4 154 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 C16orf97H3BN30 126 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 IGFBP3P17936 291 aaPredicted RBP8.16□□□□□ -1.1
NUP50-214ENST00000469163 BCL3P20749 454 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 SRSF2Q01130 221 aaKnown RBP8.16□□□□□ -1.1
NUP50-214ENST00000469163 ZNF146Q15072 292 aa8.16□□□□□ -1.1
NUP50-214ENST00000469163 ZNF474Q6S9Z5 364 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms