RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 DOCK3Q8IZD9 2030 aa-0.38□□□□□ -2.47
RBM39-226ENST00000468086 WRNQ14191 1432 aaPredicted RBP eCLIP-0.38□□□□□ -2.47
RBM39-226ENST00000468086 HRNRQ86YZ3 2850 aaPredicted RBP-0.39□□□□□ -2.47
RBM39-226ENST00000468086 KIAA1549Q9HCM3 1950 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 CASP1P29466 404 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 OR2F1Q13607 317 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 C12orf74Q32Q52 190 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 KRTAP6-1Q3LI64 71 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 CDKL4Q5MAI5 379 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 PPP1R2P1Q96PQ5 205 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 LINC00467Q9BRT7 94 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 PSTPIP2Q9H939 334 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 UBAP1Q9NZ09 502 aa-0.39□□□□□ -2.47
RBM39-226ENST00000468086 UTP11Q9Y3A2 253 aaKnown RBP-0.39□□□□□ -2.47
RBM39-226ENST00000468086 AHSA1O95433 338 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 SPINT3P49223 89 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 ACOT6Q3I5F7 207 aaPredicted RBP-0.4□□□□□ -2.47
RBM39-226ENST00000468086 ZNF833PQ6ZTB9 187 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 KRT222Q8N1A0 295 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 PTH2Q96A98 100 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 RNF122Q9H9V4 155 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 MRPL27Q9P0M9 148 aaKnown RBP-0.4□□□□□ -2.47
RBM39-226ENST00000468086 IGSF10Q6WRI0 2623 aa-0.4□□□□□ -2.47
RBM39-226ENST00000468086 CECR2Q9BXF3 1484 aa-0.41□□□□□ -2.47
RBM39-226ENST00000468086 TRAV26-2A0A0B4J265 109 aa-0.41□□□□□ -2.48
RBM39-226ENST00000468086 GADD45GO95257 159 aa-0.41□□□□□ -2.48
RBM39-226ENST00000468086 CALB1P05937 261 aa-0.41□□□□□ -2.48
RBM39-226ENST00000468086 OR2T35Q8NGX2 323 aa-0.41□□□□□ -2.48
RBM39-226ENST00000468086 ADAT3Q96EY9 351 aaPredicted RBP-0.41□□□□□ -2.48
RBM39-226ENST00000468086 C2orf50Q96LR7 162 aa-0.41□□□□□ -2.48
RBM39-226ENST00000468086 MRPS26Q9BYN8 205 aaKnown RBP-0.41□□□□□ -2.48
RBM39-226ENST00000468086 ECM29Q5VYK3 1845 aa-0.41□□□□□ -2.48
RBM39-226ENST00000468086 ASCC3Q8N3C0 2202 aaKnown RBP-0.41□□□□□ -2.48
RBM39-226ENST00000468086 SCN3AQ9NY46 2000 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 OR4C46A6NHA9 309 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 TNNC2P02585 160 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 HIST1H1EP10412 219 aaKnown RBP-0.42□□□□□ -2.48
RBM39-226ENST00000468086 AP3S2P59780 193 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 TMED1Q13445 227 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 SLAMF6Q96DU3 332 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 CCDC90BQ9GZT6 254 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 IDI2-AS1Q9NZ38 188 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 PKIGQ9Y2B9 76 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 OTOGQ6ZRI0 2925 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 SNAPC4Q5SXM2 1469 aa-0.42□□□□□ -2.48
RBM39-226ENST00000468086 LRP1Q07954 4544 aaKnown RBP-0.43□□□□□ -2.48
RBM39-226ENST00000468086 CITO14578 2027 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 J3QRK9 145 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 TGOLN2O43493 480 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 SULT1A1P50225 295 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 NKX2-5P52952 324 aaPredicted RBP-0.43□□□□□ -2.48
RBM39-226ENST00000468086 MAGOHP61326 146 aaKnown RBP-0.43□□□□□ -2.48
RBM39-226ENST00000468086 Q8IYB0 196 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 WFDC5Q8TCV5 224 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 CANT1Q8WVQ1 401 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 BDP1A6H8Y1 2624 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 CASP8AP2Q9UKL3 1982 aa-0.43□□□□□ -2.48
RBM39-226ENST00000468086 ROBO3Q96MS0 1386 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 HECW1Q76N89 1606 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 H3BRM9 83 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 DYNLT1P63172 113 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 C4orf22Q6V702 233 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 TEN1Q86WV5 123 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 SLC30A7Q8NEW0 376 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 DCUN1D1Q96GG9 259 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 NKIRAS1Q9NYS0 192 aa-0.44□□□□□ -2.48
RBM39-226ENST00000468086 HECW2Q9P2P5 1572 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 RIMBP3CA6NJZ7 1639 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 RIMBP3BA6NNM3 1639 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 RIMBP3Q9UFD9 1639 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 SMIM9A6NGZ8 99 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 F8W1H4 67 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 RHOBP62745 196 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 OR6V1Q8N148 313 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 ZNF431Q8TF32 576 aaPredicted RBP-0.45□□□□□ -2.48
RBM39-226ENST00000468086 PRADC1Q9BSG0 188 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 TMEM138Q9NPI0 162 aa-0.45□□□□□ -2.48
RBM39-226ENST00000468086 NOSIPQ9Y314 301 aaKnown RBP-0.45□□□□□ -2.48
RBM39-226ENST00000468086 MUC4Q99102 2169 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 TRAV10A0A0B4J240 114 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 TRBV30A0A0K0K1B3 111 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 C5orf67F2Z3F1 127 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 CHP2O43745 196 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 TIMM17BO60830 172 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 TTRP02766 147 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 COX7CP15954 63 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 DEFA1P59665 94 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 SPATA45Q537H7 98 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 C12orf45Q8N5I9 185 aaPredicted RBP-0.46□□□□□ -2.48
RBM39-226ENST00000468086 PCTPQ9UKL6 214 aa-0.46□□□□□ -2.48
RBM39-226ENST00000468086 C1orf196B1AJZ1 125 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 CCL4P13236 92 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 DSCR4P56555 118 aaPredicted RBP-0.47□□□□□ -2.48
RBM39-226ENST00000468086 QRFPP83859 136 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 CCDC122Q5T0U0 273 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 GLIPR1L1Q6UWM5 242 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 FAM172AQ8WUF8 416 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 TMEM133Q9H2Q1 129 aa-0.47□□□□□ -2.48
RBM39-226ENST00000468086 FBXO5Q9UKT4 447 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms