RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 TRAV25A0A0B4J276 109 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 FAM24AA6NFZ4 105 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 OR11H12B2RN74 326 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 TSC22D2O75157 780 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 CST7O76096 145 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 PTTG1O95997 202 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 TOMM40O96008 361 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 PVALBP20472 110 aaPredicted RBP9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 BMI1P35226 326 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 LYZP61626 148 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 OR10P1Q8NGE3 313 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 PPP1R14BQ96C90 147 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 MGAT4CQ9UBM8 478 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 ALG5Q9Y673 324 aa9.03□□□□□ -0.96
SHROOM3-202ENST00000466541 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 A0A1W2PS18 150 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 DNASE2O00115 360 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 FABP1P07148 127 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 HNRNPCP07910 306 aaKnown RBP eCLIP9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 GATA2P23769 480 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 TAS2R30P59541 319 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 USF2Q15853 346 aaPredicted RBP9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 TMEM14EPQ6UXP3 125 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 TMEM217Q8N7C4 229 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 TMEM231Q9H6L2 316 aa9.02□□□□□ -0.97
SHROOM3-202ENST00000466541 PMS2P5A8MQ11 134 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 TSPAN4O14817 238 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 RLN2P04090 185 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 CRYBB3P26998 211 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 P2RY1P47900 373 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 H2BFSP57053 126 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 ARL16Q0P5N6 197 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 NBEAL2Q6ZNJ1 2754 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 THAP8Q8NA92 274 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 STXBP6Q8NFX7 210 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 GRAMD2BQ96HH9 432 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 TRGV9Q99603 122 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 SRD5A3Q9H8P0 318 aa9.01□□□□□ -0.97
SHROOM3-202ENST00000466541 OR4C46A6NHA9 309 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 ORM2P19652 201 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 PAFAH1B2P68402 229 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 SLC38A11Q08AI6 406 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 RGS21Q2M5E4 152 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 TMEM182Q6ZP80 229 aaPredicted RBP9□□□□□ -0.97
SHROOM3-202ENST00000466541 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 NMES1Q9C002 83 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 MS4A6AQ9H2W1 248 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 DOK5Q9P104 306 aa9□□□□□ -0.97
SHROOM3-202ENST00000466541 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 DEDDO75618 318 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 DLK1P80370 383 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 CYCSP99999 105 aaKnown RBP8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 IL15RAQ13261 267 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 CYP2G1PQ6ZSU1 146 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 TMEM144Q7Z5S9 345 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 STX12Q86Y82 276 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 APRG1Q8IVJ8 170 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 BPIFCQ8NFQ6 507 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 OR1B1Q8NGR6 318 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 MED28Q9H204 178 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 OR5AC2Q9NZP5 309 aa8.99□□□□□ -0.97
SHROOM3-202ENST00000466541 EIF2B2P49770 351 aaKnown RBP8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 ZNF124Q15973 351 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 FAM90A2PQ658T7 463 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 C16orf54Q6UWD8 224 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 TMEM252Q8N6L7 170 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 PPP1R1CQ8WVI7 109 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 C11orf1Q9H5F2 150 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 NPVFQ9HCQ7 196 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 LYRM2Q9NU23 88 aaPredicted RBP8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 C19orf73Q9NVV2 129 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 U3KQE9 123 aa8.98□□□□□ -0.97
SHROOM3-202ENST00000466541 UBE2L5PA0A1B0GUS4 154 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 RBMY1BA6NDE4 496 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 RBMY1EA6NEQ0 496 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 E5RGE8 158 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 CD5P06127 495 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 RBMY1DP0C7P1 496 aaKnown RBP8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 CXCL3P19876 107 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 SULT1A1P50225 295 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 FCN2Q15485 313 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 ODF3L2Q3SX64 289 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 TEPPQ6URK8 271 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 SLC25A22Q9H936 323 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 PFDN2Q9UHV9 154 aa8.97□□□□□ -0.97
SHROOM3-202ENST00000466541 HELTA6NFD8 242 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 H0YIZ8 118 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 BUB3O43684 328 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 HYPMO75409 117 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 OR5G3P0C626 314 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 LINC00869P0C866 280 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 S100A11P31949 105 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 HBG1P69891 147 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms