RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TRAV10A0A0B4J240 114 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 PSG1P11464 419 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 AKR1C4P17516 323 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 CCR6P51684 374 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 OR51G1Q8NGK1 321 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 DYNC2LI1Q8TCX1 351 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 DTD1Q8TEA8 209 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 RAB2BQ8WUD1 216 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 RBKSQ9H477 322 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 SEPSECSQ9HD40 501 aaKnown RBP13.85□□□□□ -0.19
COL9A3-206ENST00000466532 MCUBQ9NWR8 336 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 HSPB7Q9UBY9 170 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 U3KQ87 197 aa13.85□□□□□ -0.19
COL9A3-206ENST00000466532 A0A0B4J2A0 478 aa13.84□□□□□ -0.19
COL9A3-206ENST00000466532 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
COL9A3-206ENST00000466532 SMCO1Q147U7 214 aa13.84□□□□□ -0.19
COL9A3-206ENST00000466532 LYZL2Q7Z4W2 148 aa13.84□□□□□ -0.19
COL9A3-206ENST00000466532 LGI3Q8N145 548 aa13.84□□□□□ -0.19
COL9A3-206ENST00000466532 C1QTNF4Q9BXJ3 329 aa13.84□□□□□ -0.19
COL9A3-206ENST00000466532 RSL24D1Q9UHA3 163 aaKnown RBP13.84□□□□□ -0.19
COL9A3-206ENST00000466532 SHPKQ9UHJ6 478 aa13.84□□□□□ -0.19
COL9A3-206ENST00000466532 SUPT4H1P63272 117 aaKnown RBP13.83□□□□□ -0.2
COL9A3-206ENST00000466532 KLF9Q13886 244 aaPredicted RBP13.83□□□□□ -0.2
COL9A3-206ENST00000466532 RNF125Q96EQ8 232 aa13.83□□□□□ -0.2
COL9A3-206ENST00000466532 PBDC1Q9BVG4 233 aa13.83□□□□□ -0.2
COL9A3-206ENST00000466532 XCL2Q9UBD3 114 aa13.83□□□□□ -0.2
COL9A3-206ENST00000466532 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
COL9A3-206ENST00000466532 H3BMM0 161 aa13.82□□□□□ -0.2
COL9A3-206ENST00000466532 ANXA3P12429 323 aa13.82□□□□□ -0.2
COL9A3-206ENST00000466532 CELA1Q9UNI1 258 aa13.82□□□□□ -0.2
COL9A3-206ENST00000466532 HECTD4Q9Y4D8 3996 aa13.81□□□□□ -0.2
COL9A3-206ENST00000466532 ZFP92A6NM28 416 aa13.81□□□□□ -0.2
COL9A3-206ENST00000466532 NUP62P37198 522 aaPredicted RBP13.81□□□□□ -0.2
COL9A3-206ENST00000466532 TMBIM6P55061 237 aa13.81□□□□□ -0.2
COL9A3-206ENST00000466532 SRPXP78539 464 aa13.81□□□□□ -0.2
COL9A3-206ENST00000466532 OR1S1Q8NH92 325 aa13.81□□□□□ -0.2
COL9A3-206ENST00000466532 BCL7BQ9BQE9 202 aa13.81□□□□□ -0.2
COL9A3-206ENST00000466532 FABP12A6NFH5 140 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
COL9A3-206ENST00000466532 NKX2-1P43699 371 aaPredicted RBP13.8□□□□□ -0.2
COL9A3-206ENST00000466532 GAMTQ14353 236 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 ZNF767PQ75MW2 155 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 PFDN2Q9UHV9 154 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
COL9A3-206ENST00000466532 HERC2O95714 4834 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 IGKV1D-37A0A075B6S9 117 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 TNFSF8P32971 234 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 ATP5IP56385 69 aaPredicted RBP13.79□□□□□ -0.2
COL9A3-206ENST00000466532 ZNF90Q03938 601 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 C12orf74Q32Q52 190 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 OR8G2PQ6IF36 304 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 RNF126Q9BV68 326 aa13.79□□□□□ -0.2
COL9A3-206ENST00000466532 SLIRPQ9GZT3 109 aaKnown RBP13.79□□□□□ -0.2
COL9A3-206ENST00000466532 DEFB131BA0A096LNP1 70 aa13.78□□□□□ -0.2
COL9A3-206ENST00000466532 DEFB1P60022 68 aa13.78□□□□□ -0.2
COL9A3-206ENST00000466532 GDF5OSQ5U4N7 250 aa13.78□□□□□ -0.2
COL9A3-206ENST00000466532 LINC00052Q96N35 136 aa13.78□□□□□ -0.2
COL9A3-206ENST00000466532 SOSTQ9BQB4 213 aa13.78□□□□□ -0.2
COL9A3-206ENST00000466532 WDR12Q9GZL7 423 aaKnown RBP13.78□□□□□ -0.2
COL9A3-206ENST00000466532 PIGBOS1A0A0B4J2F0 54 aa13.77□□□□□ -0.21
COL9A3-206ENST00000466532 NOL3O60936 208 aaKnown RBP13.77□□□□□ -0.21
COL9A3-206ENST00000466532 IGKV3-20P01619 116 aa13.77□□□□□ -0.21
COL9A3-206ENST00000466532 FABP1P07148 127 aa13.77□□□□□ -0.21
COL9A3-206ENST00000466532 FAUP35544 74 aaKnown RBP13.77□□□□□ -0.21
COL9A3-206ENST00000466532 LYZP61626 148 aa13.77□□□□□ -0.21
COL9A3-206ENST00000466532 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
COL9A3-206ENST00000466532 DUXBA0A1W2PPF3 345 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 AMBPP02760 352 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 IAPPP10997 89 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 ID1P41134 155 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 FXYD7P58549 80 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 RAB11AP62491 216 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 OR2F1Q13607 317 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 ZNF705AQ6ZN79 300 aaPredicted RBP13.76□□□□□ -0.21
COL9A3-206ENST00000466532 MCFD2Q8NI22 146 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 PPP1R14BQ96C90 147 aa13.76□□□□□ -0.21
COL9A3-206ENST00000466532 SAV1Q9H4B6 383 aaPredicted RBP13.76□□□□□ -0.21
COL9A3-206ENST00000466532 SNRPGP15A8MWD9 76 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 H3BMQ9 156 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 PITX3O75364 302 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 PSMB3P49720 205 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 C1orf194Q5T5A4 169 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 NEU1Q99519 415 aa13.75□□□□□ -0.21
COL9A3-206ENST00000466532 PAIP2BQ9ULR5 123 aaKnown RBP13.75□□□□□ -0.21
COL9A3-206ENST00000466532 IGHV3OR16-12A0A075B7B8 117 aa13.74□□□□□ -0.21
COL9A3-206ENST00000466532 ZNF705FA8MVS1 300 aaPredicted RBP13.74□□□□□ -0.21
COL9A3-206ENST00000466532 SOCS3O14543 225 aa13.74□□□□□ -0.21
COL9A3-206ENST00000466532 ZNF705DP0CH99 300 aaPredicted RBP13.74□□□□□ -0.21
COL9A3-206ENST00000466532 ZNF705BP0CI00 300 aaPredicted RBP13.74□□□□□ -0.21
COL9A3-206ENST00000466532 VAMP1P23763 118 aa13.74□□□□□ -0.21
COL9A3-206ENST00000466532 TMEM128Q5BJH2 165 aa13.74□□□□□ -0.21
COL9A3-206ENST00000466532 TRGV9Q99603 122 aa13.74□□□□□ -0.21
COL9A3-206ENST00000466532 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
COL9A3-206ENST00000466532 SMIM9A6NGZ8 99 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 EMP1P54849 157 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 AP3S2P59780 193 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms