RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PBDC1Q9BVG4 233 aa9.42□□□□□ -0.9
VPS16-206ENST00000466415 PFDN2Q9UHV9 154 aa9.42□□□□□ -0.9
VPS16-206ENST00000466415 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.41□□□□□ -0.9
VPS16-206ENST00000466415 CTXND1A0A1B0GTU2 59 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 ANKRD34BA5PLL1 514 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 HBE1P02100 147 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 IL4P05112 153 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 OR5G3P0C626 314 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 C10orf113Q5VZT2 155 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 S100A7AQ86SG5 101 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 LINC01006Q8NI28 216 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
VPS16-206ENST00000466415 C19orf24Q9BVV8 132 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 MRPL32Q9BYC8 188 aaKnown RBP9.41□□□□□ -0.9
VPS16-206ENST00000466415 HRH4Q9H3N8 390 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 ZFHX3Q15911 3703 aa9.41□□□□□ -0.9
VPS16-206ENST00000466415 FLNBO75369 2602 aaKnown RBP9.41□□□□□ -0.9
VPS16-206ENST00000466415 TLN2Q9Y4G6 2542 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
VPS16-206ENST00000466415 A0A1B0GV50 99 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 HAX1O00165 279 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 HYPMO75409 117 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 CTSGP08311 255 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 LGALS1P09382 135 aaKnown RBP9.4□□□□□ -0.9
VPS16-206ENST00000466415 S100A7P31151 101 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 FAM78BQ5VT40 261 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 LCN15Q6UWW0 184 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 IQCF2Q8IXL9 164 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 ZNF491Q8N8L2 437 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 GATAD1Q8WUU5 269 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 OR5B12Q96R08 314 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 MAP1LC3BQ9GZQ8 125 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 PEF1Q9UBV8 284 aaKnown RBP9.4□□□□□ -0.9
VPS16-206ENST00000466415 FUT9Q9Y231 359 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
VPS16-206ENST00000466415 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.91
VPS16-206ENST00000466415 SEC14L6B5MCN3 397 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 BMPR1BO00238 502 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 ADMP35318 185 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 TAS2R45P59539 299 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 PLP1P60201 277 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 SRSF2Q01130 221 aaKnown RBP9.39□□□□□ -0.91
VPS16-206ENST00000466415 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 RPP25LQ8N5L8 163 aaKnown RBP9.39□□□□□ -0.91
VPS16-206ENST00000466415 MYOZ3Q8TDC0 251 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 UBE2E2Q96LR5 201 aa9.39□□□□□ -0.91
VPS16-206ENST00000466415 PUS1Q9Y606 427 aaKnown RBP eCLIP9.39□□□□□ -0.91
VPS16-206ENST00000466415 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 CLPSL1A2RUU4 121 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 NUDT19A8MXV4 375 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 HMGB3O15347 200 aaKnown RBP9.38□□□□□ -0.91
VPS16-206ENST00000466415 GGCTO75223 188 aaKnown RBP9.38□□□□□ -0.91
VPS16-206ENST00000466415 OR2C1O95371 312 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 ZNF726P1Q15940 193 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 KHDC3LQ587J8 217 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 LINC00305Q7Z4B0 112 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 TECRQ9NZ01 308 aaKnown RBP9.38□□□□□ -0.91
VPS16-206ENST00000466415 RABAC1Q9UI14 185 aa9.38□□□□□ -0.91
VPS16-206ENST00000466415 A0A1B0GUS0 222 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 WI2-2373I1.2A0A1W2PRP0 233 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS16-206ENST00000466415 TRBV12-3P01733 135 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 FGF8P55075 233 aaPredicted RBP9.37□□□□□ -0.91
VPS16-206ENST00000466415 KIAA0141Q14154 515 aaPredicted RBP9.37□□□□□ -0.91
VPS16-206ENST00000466415 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 IL34Q6ZMJ4 242 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 MIR17HGQ75NE6 70 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 SSX7Q7RTT5 188 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 KLHL30-AS1Q8NEE0 82 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 MBD3L1Q8WWY6 194 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 TMEM37Q8WXS4 190 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 UHRF2Q96PU4 802 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 SEPSECSQ9HD40 501 aaKnown RBP9.37□□□□□ -0.91
VPS16-206ENST00000466415 RNF24Q9Y225 148 aa9.37□□□□□ -0.91
VPS16-206ENST00000466415 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 NDUFA4O00483 81 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 OR7C2O60412 319 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 CXorf1O96002 111 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 IFNA1P01562 189 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 CDX1P47902 265 aaPredicted RBP9.36□□□□□ -0.91
VPS16-206ENST00000466415 USF2Q15853 346 aaPredicted RBP9.36□□□□□ -0.91
VPS16-206ENST00000466415 RPEL1Q2QD12 228 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 TOMM20LQ6UXN7 152 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 C11orf44Q8N8P7 122 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 C4orf3Q8WVX3 66 aa9.36□□□□□ -0.91
VPS16-206ENST00000466415 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms