RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 IDI2-AS1Q9NZ38 188 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 SLC22A13Q9Y226 551 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 UTP11Q9Y3A2 253 aaKnown RBP0.76□□□□□ -2.29
LRCH3-211ENST00000466054 U3KQ87 197 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 PEAK1Q9H792 1746 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 CCDC160A6NGH7 325 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 SMIM17P0DL12 118 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 CCL7P80098 99 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 OR52L1Q8NGH7 329 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 AMELYQ99218 206 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 TMEM133Q9H2Q1 129 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 FBXO5Q9UKT4 447 aa0.75□□□□□ -2.29
LRCH3-211ENST00000466054 ARHGEF28Q8N1W1 1705 aaKnown RBP0.75□□□□□ -2.29
LRCH3-211ENST00000466054 C1orf196B1AJZ1 125 aa0.74□□□□□ -2.29
LRCH3-211ENST00000466054 RHOBP62745 196 aa0.74□□□□□ -2.29
LRCH3-211ENST00000466054 LYRM7Q5U5X0 104 aa0.74□□□□□ -2.29
LRCH3-211ENST00000466054 BCL2L10Q9HD36 194 aa0.74□□□□□ -2.29
LRCH3-211ENST00000466054 UBAP1Q9NZ09 502 aa0.74□□□□□ -2.29
LRCH3-211ENST00000466054 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
LRCH3-211ENST00000466054 DOCK3Q8IZD9 2030 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 DHFRP00374 187 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 ZNF25P17030 456 aaPredicted RBP0.73□□□□□ -2.29
LRCH3-211ENST00000466054 EIF5AP63241 154 aaKnown RBP0.73□□□□□ -2.29
LRCH3-211ENST00000466054 CLECL1Q8IZS7 167 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 BORCS5Q969J3 196 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 SLAMF6Q96DU3 332 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 LINC00467Q9BRT7 94 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 TLNRD1Q9H1K6 362 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 PARVBQ9HBI1 364 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 RIMBP3CA6NJZ7 1639 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 RIMBP3BA6NNM3 1639 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 RIMBP3Q9UFD9 1639 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 EML5Q05BV3 1969 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 SCN10AQ9Y5Y9 1956 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 OBSL1O75147 1896 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 KIF1BO60333 1816 aa0.73□□□□□ -2.29
LRCH3-211ENST00000466054 CCDC144AA2RUR9 1427 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 ZFYVE9O95405 1425 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 TMEM114B3SHH9 223 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 OR7C1O76099 320 aaPredicted RBP0.72□□□□□ -2.29
LRCH3-211ENST00000466054 RNASE4P34096 147 aaKnown RBP0.72□□□□□ -2.29
LRCH3-211ENST00000466054 SRP14P37108 136 aaKnown RBP0.72□□□□□ -2.29
LRCH3-211ENST00000466054 SPA17Q15506 151 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 FAM74A1Q5RGS3 127 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 GNPDA2Q8TDQ7 276 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 PATE1Q8WXA2 126 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 BTF3L4Q96K17 158 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 PRAP1Q96NZ9 151 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 PRADC1Q9BSG0 188 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 UCK1Q9HA47 277 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 KIAA1549Q9HCM3 1950 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 FMN1Q68DA7 1419 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 MYH7BA7E2Y1 1941 aa0.72□□□□□ -2.29
LRCH3-211ENST00000466054 SRIP30626 198 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 MYL6P60660 151 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 DYNLT1P63172 113 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 Q8N6K4 173 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 SLC30A7Q8NEW0 376 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 OR11H6Q8NGC7 330 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 TMEM254Q8TBM7 123 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 YPEL2Q96QA6 119 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 GPER1Q99527 375 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 TMEM70Q9BUB7 260 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 KIFC1Q9BW19 673 aa0.71□□□□□ -2.3
LRCH3-211ENST00000466054 NMNAT1Q9HAN9 279 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-211ENST00000466054 CHCHD2Q9Y6H1 151 aaPredicted RBP0.71□□□□□ -2.3
LRCH3-211ENST00000466054 E9PCH4 1651 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 TRGV10A0A0A0MS01 117 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 TRAV4A0A0B4J268 109 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 CCL16O15467 120 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 GADD45GO95257 159 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 ERP29P30040 261 aaKnown RBP0.7□□□□□ -2.3
LRCH3-211ENST00000466054 KRR1Q13601 381 aaKnown RBP0.7□□□□□ -2.3
LRCH3-211ENST00000466054 AKIRIN2Q53H80 203 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 MNS1Q8NEH6 495 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 SIGMAR1Q99720 223 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 KDM6AO15550 1401 aaPredicted RBP0.7□□□□□ -2.3
LRCH3-211ENST00000466054 TNS3Q68CZ2 1445 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 MYH10P35580 1976 aa0.7□□□□□ -2.3
LRCH3-211ENST00000466054 TRBV19A0A075B6N1 114 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 TRBV6-4A0A1B0GX49 114 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 TCRBV4S1A1TA0A5B7 111 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 NCR3O14931 201 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 CCL25O15444 150 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 PIGPP57054 158 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 PSG9Q00887 426 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 RRN3P1Q2M238 152 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 Q8IYB0 196 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 OR2T35Q8NGX2 323 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 TMEM126AQ9H061 195 aa0.69□□□□□ -2.3
LRCH3-211ENST00000466054 A8MWV9 139 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 TIMM17BO60830 172 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 LIN52Q52LA3 116 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 C22orf39Q6P5X5 142 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 C2orf82Q6UX34 121 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 LINC00322Q6ZN03 302 aaPredicted RBP0.68□□□□□ -2.3
LRCH3-211ENST00000466054 SBSPONQ8IVN8 264 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 ST6GALNAC3Q8NDV1 305 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 TP53RKQ96S44 253 aa0.68□□□□□ -2.3
LRCH3-211ENST00000466054 IMUPQ9GZP8 106 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms