RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 A0A1B0GU03 582 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 FAM240BA0A1B0GVZ2 78 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 I3L2K1 104 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 TCRBP04435 133 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 MFAP4P55083 255 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 DEFB1P60022 68 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 HAMPP81172 84 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 ZNF705AQ6ZN79 300 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-214ENST00000465269 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 DCANP1Q8TF63 244 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 TMEM230Q96A57 120 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 TP53RKQ96S44 253 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 GINS3Q9BRX5 216 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 NDUFA4L2Q9NRX3 87 aa10.49□□□□□ -0.73
HDAC6-214ENST00000465269 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC6-214ENST00000465269 TRAV6A0A075B6T7 132 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 CRYM-AS1A6NIL9 109 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 HPRT1P00492 218 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 OR5AC1P0C628 307 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 NQO2P16083 231 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-214ENST00000465269 TAS2R31P59538 309 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 DEFA1P59665 94 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 DEFA3P59666 94 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 LSM10Q969L4 123 aaKnown RBP10.48□□□□□ -0.73
HDAC6-214ENST00000465269 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 LINC00588Q9Y4M8 146 aa10.48□□□□□ -0.73
HDAC6-214ENST00000465269 RPS10-NUDT3A0A1W2PQS6 291 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 DBX1A6NMT0 343 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 ZNF705FA8MVS1 300 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-214ENST00000465269 RBFOX2O43251 390 aaKnown RBP eCLIP10.47□□□□□ -0.73
HDAC6-214ENST00000465269 NUDT3O95989 172 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 MT-CO2P00403 227 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 IGKV3-20P01619 116 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 CD5P06127 495 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 ZNF705DP0CH99 300 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-214ENST00000465269 ZNF705BP0CI00 300 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-214ENST00000465269 ANXA7P20073 488 aaKnown RBP10.47□□□□□ -0.73
HDAC6-214ENST00000465269 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 NRARPQ7Z6K4 114 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 ENKURQ8TC29 256 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
HDAC6-214ENST00000465269 PRR13Q9NZ81 148 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
HDAC6-214ENST00000465269 GNG7O60262 68 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 KRASP01116 189 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 VAMP1P23763 118 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 G6PCP35575 357 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 P2RY1P47900 373 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 SUPT4H1P63272 117 aaKnown RBP10.46□□□□□ -0.73
HDAC6-214ENST00000465269 TRIM16LQ309B1 348 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 TMEM128Q5BJH2 165 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 GLYATL2Q8WU03 294 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 C20orf85Q9H1P6 137 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 PLEKHA2Q9HB19 425 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 NUDT15Q9NV35 164 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 RFNGQ9Y644 331 aa10.46□□□□□ -0.73
HDAC6-214ENST00000465269 LRP1Q07954 4544 aaKnown RBP10.46□□□□□ -0.74
HDAC6-214ENST00000465269 H3BMM0 161 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 IGKV1-39P01597 117 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 IGKV1D-39P04432 117 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 DHODHQ02127 395 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 DHRS2Q13268 280 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 HSD17B13Q7Z5P4 300 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-214ENST00000465269 NEU1Q99519 415 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 TMEM222Q9H0R3 208 aa10.45□□□□□ -0.74
HDAC6-214ENST00000465269 FAM212BQ9NTI7 297 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-214ENST00000465269 YTHDF2Q9Y5A9 579 aaKnown RBP10.45□□□□□ -0.74
HDAC6-214ENST00000465269 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 HELTA6NFD8 242 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 OR4E1P0C645 316 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 UCP1P25874 307 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 KRTAP10-1P60331 282 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 ERVK-16P61578 105 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 DAD1P61803 113 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 C4orf46Q504U0 113 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 GDF5OSQ5U4N7 250 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 THOC7Q6I9Y2 204 aaKnown RBP10.44□□□□□ -0.74
HDAC6-214ENST00000465269 SELENOHQ8IZQ5 122 aaKnown RBP10.44□□□□□ -0.74
HDAC6-214ENST00000465269 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 OR1P1Q8NH06 330 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 AIFM2Q9BRQ8 373 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 COMMD9Q9P000 198 aa10.44□□□□□ -0.74
HDAC6-214ENST00000465269 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 MARCH11A6NNE9 402 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 B3GALNT1O75752 331 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 SFT2D2O95562 160 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 CDS2O95674 445 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 PRM2P04554 102 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 ANXA3P12429 323 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 IZUMO4Q1ZYL8 232 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 TMEM268Q5VZI3 342 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 GSG1LQ6UXU4 331 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms