RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 KLRD1Q13241 179 aa14.9□□□□□ -0.02
TSPAN4-210ENST00000464987 MRPL41Q8IXM3 137 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-210ENST00000464987 TMEM116Q8NCL8 245 aa14.9□□□□□ -0.02
TSPAN4-210ENST00000464987 SRSF12Q8WXF0 261 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-210ENST00000464987 TRAV9-1A0A075B6T8 112 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 ZNF705GA8MUZ8 300 aaPredicted RBP14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 F2Z2F3 143 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 TIMM23O14925 209 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 ETFRF1Q6IPR1 90 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 SSBP3Q9BWW4 388 aaPredicted RBP14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 CDC42EP3Q9UKI2 254 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 HILPDAQ9Y5L2 63 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 F11RQ9Y624 299 aaKnown RBP14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 HIVEP3Q5T1R4 2406 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 H3BTX0 84 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 ISLRO14498 428 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 TCAPO15273 167 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 LY6G5BQ8NDX9 201 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 TRGV9Q99603 122 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 SERTAD4Q9NUC0 356 aa14.89□□□□□ -0.03
TSPAN4-210ENST00000464987 A0A1W2PRD5 423 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 A0A1W2PRF3 423 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 A0A1W2PRM7 423 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 PEX7O00628 323 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 LIPFP07098 398 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 ARL6IP6Q8N6S5 226 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 TSTD3H0UI37 97 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 RBP4P02753 201 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 MYCNOSP40205 109 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 CX3CL1P78423 397 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 PLGLAQ15195 96 aa14.88□□□□□ -0.03
TSPAN4-210ENST00000464987 ZNF664Q8N3J9 261 aa14.87□□□□□ -0.03
TSPAN4-210ENST00000464987 PERPQ96FX8 193 aa14.87□□□□□ -0.03
TSPAN4-210ENST00000464987 RAB1BQ9H0U4 201 aa14.87□□□□□ -0.03
TSPAN4-210ENST00000464987 NCOR2Q9Y618 2525 aa14.87□□□□□ -0.03
TSPAN4-210ENST00000464987 CHD8Q9HCK8 2581 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 CD33P20138 364 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 UCNP55089 124 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 MRPL54Q6P161 138 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 FAM103A1Q9BTL3 118 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 RPH3ALQ9UNE2 315 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 MMDQ15546 238 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 KIAA1644Q3SXP7 199 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 TPTE2P1Q5T6R2 138 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 C11orf71Q6IPW1 123 aa14.86□□□□□ -0.03
TSPAN4-210ENST00000464987 CRISP2P16562 243 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 BAGE2Q86Y30 109 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 C22orf15Q8WYQ4 148 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 WNT10AQ9GZT5 417 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 CBLN4Q9NTU7 201 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 VPS13CQ709C8 3753 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 A0A1W2PPR1 153 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 SMIM27A0A1W2PRY6 76 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 PGPA6NDG6 321 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 I3L2K1 104 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 PSG1P11464 419 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 PRR27Q6MZM9 219 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 TMEM136Q6ZRR5 245 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 CMTM2Q8TAZ6 248 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 GNB1LQ9BYB4 327 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 NAT8BQ9UHF3 227 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 CACNA1AO00555 2505 aa14.85□□□□□ -0.03
TSPAN4-210ENST00000464987 HYPMO75409 117 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 SERF1AO75920 110 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 SLC25A5P05141 298 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 NBEAP1P0C6P0 100 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 IGLC1P0CG04 106 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 GP9P14770 177 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 HTR1DP28221 377 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 ANKRD39Q53RE8 183 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 CORTO00230 105 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 CFHR4Q92496 578 aa14.84□□□□□ -0.03
TSPAN4-210ENST00000464987 CNIH1O95406 144 aa14.83□□□□□ -0.04
TSPAN4-210ENST00000464987 LYZP61626 148 aa14.83□□□□□ -0.04
TSPAN4-210ENST00000464987 NUTF2P61970 127 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-210ENST00000464987 EPDR1Q9UM22 224 aa14.83□□□□□ -0.04
TSPAN4-210ENST00000464987 AKAP6Q13023 2319 aa14.83□□□□□ -0.04
TSPAN4-210ENST00000464987 NUDT10Q8NFP7 164 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 NUDT11Q96G61 164 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 DPM3Q9P2X0 92 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 NDUFS7O75251 213 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 PAX2Q02962 417 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 KLF17Q5JT82 389 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 OR11H6Q8NGC7 330 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 TIMD4Q96H15 378 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 C7orf69Q9H7B7 122 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 CBY1Q9Y3M2 126 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 S4R3C0 116 aa14.82□□□□□ -0.04
TSPAN4-210ENST00000464987 PLP1P60201 277 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 TMEM183BQ1AE95 376 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 MBD6Q96DN6 1003 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 MS4A10Q96PG2 267 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 GNB4Q9HAV0 340 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 LOC105371242A0A075B767 164 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 K7EIM0 57 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 PRB4P10163 310 aaPredicted RBP14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 LY6DQ14210 128 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 DYNAPQ8N1N2 210 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 STXBP6Q8NFX7 210 aa14.81□□□□□ -0.04
TSPAN4-210ENST00000464987 RNF5Q99942 180 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms