RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 DOCK3Q8IZD9 2030 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 LAMA4Q16363 1823 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 MYH7BA7E2Y1 1941 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 CCDC160A6NGH7 325 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 TMEM114B3SHH9 223 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 ZNF736B4DX44 427 aaPredicted RBP0.82□□□□□ -2.28
USP9X-204ENST00000463829 HAND1O96004 215 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 MYL6P60660 151 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 MPV17LQ2QL34 196 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 SOSTDC1Q6X4U4 206 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 CDC42SE1Q9NRR8 79 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 UBAP1Q9NZ09 502 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 FBXO5Q9UKT4 447 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 SLC22A13Q9Y226 551 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 MYO3BQ8WXR4 1341 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 OBSL1O75147 1896 aa0.82□□□□□ -2.28
USP9X-204ENST00000463829 CCDC144AA2RUR9 1427 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 MYH10P35580 1976 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 PEAK1Q9H792 1746 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 CCL7P80098 99 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 LYRM7Q5U5X0 104 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 CLECL1Q8IZS7 167 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 TMEM133Q9H2Q1 129 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 BCL2L10Q9HD36 194 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 RIMBP3CA6NJZ7 1639 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 RIMBP3BA6NNM3 1639 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 RIMBP3Q9UFD9 1639 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 ARHGEF28Q8N1W1 1705 aaKnown RBP0.81□□□□□ -2.28
USP9X-204ENST00000463829 ZFYVE9O95405 1425 aa0.81□□□□□ -2.28
USP9X-204ENST00000463829 SNRNP200O75643 2136 aaKnown RBP0.8□□□□□ -2.28
USP9X-204ENST00000463829 EIF5AP63241 154 aaKnown RBP0.8□□□□□ -2.28
USP9X-204ENST00000463829 SPA17Q15506 151 aa0.8□□□□□ -2.28
USP9X-204ENST00000463829 SLAMF6Q96DU3 332 aa0.8□□□□□ -2.28
USP9X-204ENST00000463829 BTF3L4Q96K17 158 aa0.8□□□□□ -2.28
USP9X-204ENST00000463829 AMELYQ99218 206 aa0.8□□□□□ -2.28
USP9X-204ENST00000463829 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
USP9X-204ENST00000463829 SRIP30626 198 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 DEFA3P59666 94 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 DYNLT1P63172 113 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 SLC30A7Q8NEW0 376 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 BORCS5Q969J3 196 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 KIFC1Q9BW19 673 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 TLNRD1Q9H1K6 362 aa0.79□□□□□ -2.28
USP9X-204ENST00000463829 GADD45GO95257 159 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 ZNF25P17030 456 aaPredicted RBP0.78□□□□□ -2.28
USP9X-204ENST00000463829 RNASE4P34096 147 aaKnown RBP0.78□□□□□ -2.28
USP9X-204ENST00000463829 SRP14P37108 136 aaKnown RBP0.78□□□□□ -2.28
USP9X-204ENST00000463829 FAM74A1Q5RGS3 127 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 MNS1Q8NEH6 495 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 TMEM254Q8TBM7 123 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 GNPDA2Q8TDQ7 276 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 PRAP1Q96NZ9 151 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 SIGMAR1Q99720 223 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 PRADC1Q9BSG0 188 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 UCK1Q9HA47 277 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 NMNAT1Q9HAN9 279 aaPredicted RBP0.78□□□□□ -2.28
USP9X-204ENST00000463829 FMN1Q68DA7 1419 aa0.78□□□□□ -2.28
USP9X-204ENST00000463829 E9PCH4 1651 aa0.78□□□□□ -2.29
USP9X-204ENST00000463829 CNTRLQ7Z7A1 2325 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 OR7C1O76099 320 aaPredicted RBP0.77□□□□□ -2.29
USP9X-204ENST00000463829 DHFRP00374 187 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 ERP29P30040 261 aaKnown RBP0.77□□□□□ -2.29
USP9X-204ENST00000463829 PIGPP57054 158 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 KRR1Q13601 381 aaKnown RBP0.77□□□□□ -2.29
USP9X-204ENST00000463829 LIN52Q52LA3 116 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 LINC00467Q9BRT7 94 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 KIAA1549Q9HCM3 1950 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 SCN8AQ9UQD0 1980 aa0.77□□□□□ -2.29
USP9X-204ENST00000463829 CASP8AP2Q9UKL3 1982 aa0.76□□□□□ -2.29
USP9X-204ENST00000463829 TRGV10A0A0A0MS01 117 aa0.76□□□□□ -2.29
USP9X-204ENST00000463829 TRAV4A0A0B4J268 109 aa0.76□□□□□ -2.29
USP9X-204ENST00000463829 TIMM17BO60830 172 aa0.76□□□□□ -2.29
USP9X-204ENST00000463829 PATE1Q8WXA2 126 aa0.76□□□□□ -2.29
USP9X-204ENST00000463829 PARVBQ9HBI1 364 aa0.76□□□□□ -2.29
USP9X-204ENST00000463829 ZNF469Q96JG9 3925 aaPredicted RBP0.76□□□□□ -2.29
USP9X-204ENST00000463829 HEATR1Q9H583 2144 aaKnown RBP0.76□□□□□ -2.29
USP9X-204ENST00000463829 TNS3Q68CZ2 1445 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 TRBV6-4A0A1B0GX49 114 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 CCL25O15444 150 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 DNAL4O96015 105 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 Q8IYB0 196 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 ST6GALNAC3Q8NDV1 305 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 YPEL2Q96QA6 119 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 GPER1Q99527 375 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 CHCHD2Q9Y6H1 151 aaPredicted RBP0.75□□□□□ -2.29
USP9X-204ENST00000463829 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
USP9X-204ENST00000463829 TRBV19A0A075B6N1 114 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 TCRBV4S1A1TA0A5B7 111 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 NCR3O14931 201 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 CCL16O15467 120 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 SERPINB9P50453 376 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 ERVS71-1P61550 626 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 RRN3P1Q2M238 152 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 AKIRIN2Q53H80 203 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 SPRNQ5BIV9 151 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 BCL2L15Q5TBC7 163 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 C22orf39Q6P5X5 142 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 Q8N6K4 173 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 OR11H6Q8NGC7 330 aa0.74□□□□□ -2.29
USP9X-204ENST00000463829 OR2T35Q8NGX2 323 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms