RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 IL4P05112 153 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
VPS52-214ENST00000463486 ODF3L2Q3SX64 289 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 GSG1LQ6UXU4 331 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 STPG3Q8N7X2 389 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 METTL26Q96S19 204 aa13.18□□□□□ -0.3
VPS52-214ENST00000463486 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
VPS52-214ENST00000463486 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
VPS52-214ENST00000463486 ZFP92A6NM28 416 aa13.17□□□□□ -0.3
VPS52-214ENST00000463486 SIX6O95475 246 aa13.17□□□□□ -0.3
VPS52-214ENST00000463486 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
VPS52-214ENST00000463486 RAB32Q13637 225 aa13.17□□□□□ -0.3
VPS52-214ENST00000463486 OR8G2PQ6IF36 304 aa13.17□□□□□ -0.3
VPS52-214ENST00000463486 TMEM182Q6ZP80 229 aaPredicted RBP13.17□□□□□ -0.3
VPS52-214ENST00000463486 TCF24Q7RTU0 167 aa13.17□□□□□ -0.3
VPS52-214ENST00000463486 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
VPS52-214ENST00000463486 TMEM144Q7Z5S9 345 aa13.16□□□□□ -0.3
VPS52-214ENST00000463486 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
VPS52-214ENST00000463486 LSM5Q9Y4Y9 91 aaKnown RBP13.16□□□□□ -0.3
VPS52-214ENST00000463486 A0A1W2PS18 150 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 BUB3O43684 328 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 PTTG1O95997 202 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 CD5P06127 495 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 HNRNPCP07910 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS52-214ENST00000463486 P2RY1P47900 373 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 H2BFSP57053 126 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 DLK1P80370 383 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 HAGHQ16775 308 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 TM2D3Q9BRN9 247 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
VPS52-214ENST00000463486 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 FNDC10F2Z333 226 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 GOSR2O14653 212 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 BMI1P35226 326 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 OR2F1Q13607 317 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 GBGT1Q8N5D6 347 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 TUBA4BQ9H853 241 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
VPS52-214ENST00000463486 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 H0YIZ8 118 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 DEDDO75618 318 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
VPS52-214ENST00000463486 RRAS2P62070 204 aaPredicted RBP13.13□□□□□ -0.31
VPS52-214ENST00000463486 OR10P1Q8NGE3 313 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 NMES1Q9C002 83 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
VPS52-214ENST00000463486 UBQLN2Q9UHD9 624 aa13.13□□□□□ -0.31
VPS52-214ENST00000463486 L7N2F9 121 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 TFPI2P48307 235 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 EIF2B2P49770 351 aaKnown RBP13.12□□□□□ -0.31
VPS52-214ENST00000463486 VAMP2P63027 116 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 FAM24BQ8N5W8 94 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
VPS52-214ENST00000463486 IGSF23A1L1A6 192 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 K7EQG2 157 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 FABP1P07148 127 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 S100A10P60903 97 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 AKR1C1Q04828 323 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 ZNF124Q15973 351 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 PBDC1Q9BVG4 233 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 NPVFQ9HCQ7 196 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 U3KQK5 164 aa13.11□□□□□ -0.31
VPS52-214ENST00000463486 CST7O76096 145 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 CFDP00746 253 aaPredicted RBP13.1□□□□□ -0.31
VPS52-214ENST00000463486 CAV2P51636 162 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 LYZP61626 148 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 CYP2G1PQ6ZSU1 146 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 TMEM252Q8N6L7 170 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 GRAMD2BQ96HH9 432 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
VPS52-214ENST00000463486 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 OR5AC2Q9NZP5 309 aa13.1□□□□□ -0.31
VPS52-214ENST00000463486 SMCO3A2RU48 225 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 SSNA1O43805 119 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 PVALBP20472 110 aaPredicted RBP13.09□□□□□ -0.31
VPS52-214ENST00000463486 PAFAH1B2P68402 229 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 SLC38A11Q08AI6 406 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 WFDC3Q8IUB2 231 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
VPS52-214ENST00000463486 HELTA6NFD8 242 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 CXCL3P19876 107 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 SULT1A1P50225 295 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 BCAP31P51572 246 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 PLP1P60201 277 aa13.08□□□□□ -0.32
VPS52-214ENST00000463486 RPL11P62913 178 aaKnown RBP13.08□□□□□ -0.32
VPS52-214ENST00000463486 CYCSP99999 105 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms