RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 OR13C7P0DN81 318 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 RNASE2P10153 161 aaKnown RBP5.73□□□□□ -1.49
UBE4B-204ENST00000462658 SUB1P53999 127 aaKnown RBP eCLIP5.73□□□□□ -1.49
UBE4B-204ENST00000462658 CX3CL1P78423 397 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 WT1-ASQ06250 92 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 FXYD3Q14802 87 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 AANATQ16613 207 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 LRRC75BQ2VPJ9 315 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 BSXQ3C1V8 233 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 C2orf83Q53S99 150 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 EIF5AL1Q6IS14 154 aaKnown RBP5.73□□□□□ -1.49
UBE4B-204ENST00000462658 SLC25A24Q6NUK1 477 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 ZNF562Q6V9R5 426 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 Q8N9W7 124 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 HSD17B11Q8NBQ5 300 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 SCGB1C1Q8TD33 95 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 SRSF12Q8WXF0 261 aaKnown RBP5.73□□□□□ -1.49
UBE4B-204ENST00000462658 RBM14Q96PK6 669 aaKnown RBP5.73□□□□□ -1.49
UBE4B-204ENST00000462658 RASL11BQ9BPW5 248 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 GINS3Q9BRX5 216 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 TMEM147Q9BVK8 224 aa5.73□□□□□ -1.49
UBE4B-204ENST00000462658 NIPBLQ6KC79 2804 aaeCLIP5.72□□□□□ -1.49
UBE4B-204ENST00000462658 IGLC7A0M8Q6 106 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 PRSS46E5RG02 174 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 H3BUX3 64 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 REG1AP05451 166 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 SEC11BP0C7V7 166 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 SPP1P10451 314 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 AREGP15514 252 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 RAB14P61106 215 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 DLK1P80370 383 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 DEFB112Q30KQ8 113 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 FAM74A1Q5RGS3 127 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 HSD17B13Q7Z5P4 300 aaPredicted RBP5.72□□□□□ -1.49
UBE4B-204ENST00000462658 SSMEM1Q8WWF3 244 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 C22orf15Q8WYQ4 148 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 P2RX4Q99571 388 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 SMR3AQ99954 134 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 GGACTQ9BVM4 153 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 PARD6GQ9BYG4 376 aaPredicted RBP5.72□□□□□ -1.49
UBE4B-204ENST00000462658 KRTAP1-5Q9BYS1 174 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 UQCC1Q9NVA1 299 aa5.72□□□□□ -1.49
UBE4B-204ENST00000462658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.71□□□□□ -1.49
UBE4B-204ENST00000462658 TET2Q6N021 2002 aaPredicted RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 IGHV7-81A0A0B4J1V7 117 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 UBE2L5PA0A1B0GUS4 154 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 MDFIC2A0A1B0GVS7 189 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 SMCO3A2RU48 225 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 A6NDX4 124 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 PRSS47A8MTI9 375 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 FGF16O43320 207 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 CD5LO43866 347 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 HLA-DRB1P01911 266 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 APELAP0DMC3 54 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 ATP6V0CP27449 155 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 LY6EQ16553 131 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 VWC2Q2TAL6 325 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 CLLU1Q5K131 121 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 C9orf139Q6ZV77 190 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 TEX29Q8N6K0 151 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 C5orf56Q8N8D9 126 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 OR2G3Q8NGZ4 309 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 RNASEH2CQ8TDP1 164 aaKnown RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 PCNPQ8WW12 178 aaKnown RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 ARPC1AQ92747 370 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 TAF15Q92804 592 aaKnown RBP eCLIP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 GNPNAT1Q96EK6 184 aaPredicted RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 FAM103A1Q9BTL3 118 aaKnown RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 WDR61Q9GZS3 305 aaKnown RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 SH3BGRL3Q9H299 93 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 PITPNC1Q9UKF7 332 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 MOB4Q9Y3A3 225 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 SONP18583 2426 aaKnown RBP5.71□□□□□ -1.5
UBE4B-204ENST00000462658 TNCP24821 2201 aa5.71□□□□□ -1.5
UBE4B-204ENST00000462658 FNDC10F2Z333 226 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 FAM157CP0CG43 387 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 CTRB1P17538 263 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 MDKP21741 143 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-204ENST00000462658 FGF7P21781 194 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 GPX4P36969 197 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-204ENST00000462658 IER3P46695 156 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 SULT1A2P50226 295 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 CD81P60033 236 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 NDPQ00604 133 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 RUNX1Q01196 453 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 PVRIGQ6DKI7 326 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 CTRB2Q6GPI1 263 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 BTNL8Q6UX41 500 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 OR1P1Q8NH06 330 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 LRRC20Q8TCA0 184 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 CACNG8Q8WXS5 425 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 HSPB9Q9BQS6 159 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 RSG1Q9BU20 258 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 NPVFQ9HCQ7 196 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 YAE1D1Q9NRH1 226 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 WDR83OSQ9Y284 106 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 F11RQ9Y624 299 aaKnown RBP5.7□□□□□ -1.5
UBE4B-204ENST00000462658 RFNGQ9Y644 331 aa5.7□□□□□ -1.5
UBE4B-204ENST00000462658 ABCA1O95477 2261 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms