RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ODF3L2Q3SX64 289 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 FAM90A2PQ658T7 463 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 CEMP1Q6PRD7 247 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 LILRB2Q8N423 598 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR1S2Q8NGQ3 325 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 MITD1Q8WV92 249 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 ST8SIA2Q92186 375 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 RNF2Q99496 336 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 SEC22CQ9BRL7 303 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 MAGT1Q9H0U3 335 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 VSIRQ9H7M9 311 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 NUDT15Q9NV35 164 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 TP53TG1Q9Y2A0 90 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 U3KQ87 197 aa5.85□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGKV1D-37A0A075B6S9 117 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 TRAV6A0A075B6T7 132 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGHV3OR16-13A0A075B7E8 117 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 ELOA3CA0A087WX78 387 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGHV3-74A0A0B4J1X5 117 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 DEDDO75618 318 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 IFNA10P01566 189 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 SLC25A4P12235 298 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 ATF4P18848 351 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 OR10J1P30954 320 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 POLR2GP62487 172 aaKnown RBP eCLIP5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 ID3Q02535 119 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 ZNF846Q147U1 533 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 C4orf46Q504U0 113 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 Q6ZWC4 215 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 COQ8AQ8NI60 647 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 NPIPB3Q92617 1050 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 SPAG8Q99932 426 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 RHPN1-AS1Q9BWJ2 59 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 WDR12Q9GZL7 423 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 BATF3Q9NR55 127 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 MUC4Q99102 2169 aa5.84□□□□□ -1.47
CDC42BPA-210ENST00000462553 IGKV1OR2-108A0A075B7D4 117 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 TRAV14DV4A0A0A6YYC5 116 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 H3BP45 60 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 WRBO00258 174 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 CCSO14618 274 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 SPRY2O43597 315 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 SYNGR2O43760 224 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 MED6O75586 246 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 H2AFB2P0C5Z0 115 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 CRYBB3P26998 211 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 BMI1P35226 326 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 GPX4P36969 197 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 PAX9P55771 341 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 ATP5IP56385 69 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 USF2Q15853 346 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 NOXA1Q86UR1 476 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 ZBTB8BQ8NAP8 495 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 ZNF431Q8TF32 576 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 RNF183Q96D59 192 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 ACY3Q96HD9 319 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 GINS3Q9BRX5 216 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 UBQLN2Q9UHD9 624 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 RCL1Q9Y2P8 373 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 U3KQE9 123 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 HSPG2P98160 4391 aa5.83□□□□□ -1.48
CDC42BPA-210ENST00000462553 TRAV30A0A087WSZ9 112 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 IGHV3-66A0A0C4DH42 116 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 FAM240BA0A1B0GVZ2 78 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 PMS2P5A8MQ11 134 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 CCNKO75909 580 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 TOMM40O96008 361 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 IFNA4P05014 189 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 APOC4P55056 127 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 YPEL3P61236 119 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 GAMTQ14353 236 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 IAH1Q2TAA2 248 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 ETFRF1Q6IPR1 90 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 RBPMS2Q6ZRY4 209 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 TCF24Q7RTU0 167 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 FAM24BQ8N5W8 94 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 THAP8Q8NA92 274 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 CIB3Q96Q77 187 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 C11orf1Q9H5F2 150 aa5.82□□□□□ -1.48
CDC42BPA-210ENST00000462553 KIR2DL5BA0A0G2JN68 375 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 KIR2DL5BA0A0G2JPC4 375 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 SSSCA1O60232 199 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 DFFBO76075 338 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 IFNA21P01568 189 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 MBPP02686 304 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 IL5P05113 134 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 PSG1P11464 419 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 NKX2-1P43699 371 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 RAB11AP62491 216 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 ZNF90Q03938 601 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 SPANXN5Q5MJ07 72 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 LGALS9CQ6DKI2 356 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 LAMTOR1Q6IAA8 161 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 MZT2BQ6NZ67 158 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 TMEM14EPQ6UXP3 125 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 ACOT7LQ6ZUV0 252 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 KIR2DL5AQ8N109 375 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 STPG3Q8N7X2 389 aa5.81□□□□□ -1.48
CDC42BPA-210ENST00000462553 KIR2DL5BQ8NHK3 375 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms