RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 CD7P09564 240 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 OPRK1P41145 380 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 HTR2BP41595 481 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 INPP1P49441 399 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 CD81P60033 236 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 TRIQKQ629K1 86 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 LYZL2Q7Z4W2 148 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 LRTM2Q8N967 370 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 SLC24A4Q8NFF2 622 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 OR10C1Q96KK4 312 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 C20orf24Q9BUV8 137 aa5.16□□□□□ -1.58
NUP50-212ENST00000461194 FNDC4Q9H6D8 234 aaPredicted RBP5.16□□□□□ -1.58
NUP50-212ENST00000461194 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
NUP50-212ENST00000461194 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 IGLV5-39A0A0G2JS06 123 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 A0A1B0GU03 582 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 RPS10-NUDT3A0A1W2PQS6 291 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 OR11H12B2RN74 326 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 TSPAN4O14817 238 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 PITX3O75364 302 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 CLN5O75503 358 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 YIF1AO95070 293 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 NDUFB6O95139 128 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 TMEM50AO95807 157 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 UBE2MP61081 183 aaKnown RBP5.15□□□□□ -1.59
NUP50-212ENST00000461194 TNFRSF9Q07011 255 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 PPP1R1AQ13522 171 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 ANKRD55Q3KP44 614 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 C2orf83Q53S99 150 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 LAMTOR1Q6IAA8 161 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 LINC00322Q6ZN03 302 aaPredicted RBP5.15□□□□□ -1.59
NUP50-212ENST00000461194 ZNF600Q6ZNG1 722 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 RBPMS2Q6ZRY4 209 aaKnown RBP5.15□□□□□ -1.59
NUP50-212ENST00000461194 SLC16A13Q7RTY0 426 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 NOXA1Q86UR1 476 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 CENPSQ8N2Z9 138 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 OR4X1Q8NH49 305 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 RNASEH2CQ8TDP1 164 aaKnown RBP5.15□□□□□ -1.59
NUP50-212ENST00000461194 RCHY1Q96PM5 261 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 SPAG8Q99932 426 aaPredicted RBP5.15□□□□□ -1.59
NUP50-212ENST00000461194 TM2D3Q9BRN9 247 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 HIPK2Q9H2X6 1198 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 TUBA4BQ9H853 241 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 MRPL36Q9P0J6 103 aaKnown RBP5.15□□□□□ -1.59
NUP50-212ENST00000461194 HSPB7Q9UBY9 170 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 SMPXQ9UHP9 88 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 SELENOKQ9Y6D0 94 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 U3KQ87 197 aa5.15□□□□□ -1.59
NUP50-212ENST00000461194 IGHV3OR16-8A0A075B7F1 116 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 TRAV30A0A087WSZ9 112 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 TRAV14DV4A0A0A6YYC5 116 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 IGHV7-4-1A0A0J9YVY3 117 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 CENPXA8MT69 81 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 CHEK1O14757 476 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 ZNF207O43670 478 aaKnown RBP5.14□□□□□ -1.59
NUP50-212ENST00000461194 SCGB2A1O75556 95 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 SLC25A4P12235 298 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 SLC25A6P12236 298 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 IL7P13232 177 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 NPY1RP25929 384 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 BTCP35070 178 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 ATP5IP56385 69 aaPredicted RBP5.14□□□□□ -1.59
NUP50-212ENST00000461194 HAGHQ16775 308 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 ETFRF1Q6IPR1 90 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 PRSS54Q6PEW0 395 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 TOMM20LQ6UXN7 152 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 LINC00299Q6ZSB3 139 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 DEFB125Q8N687 156 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 TMEM116Q8NCL8 245 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 OR52B4Q8NGK2 314 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 DTD1Q8TEA8 209 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 TMEM170AQ8WVE7 144 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 C7orf50Q9BRJ6 194 aaKnown RBP5.14□□□□□ -1.59
NUP50-212ENST00000461194 GINS3Q9BRX5 216 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 RHPN1-AS1Q9BWJ2 59 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 RBKSQ9H477 322 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 TMED3Q9Y3Q3 217 aa5.14□□□□□ -1.59
NUP50-212ENST00000461194 PUS1Q9Y606 427 aaKnown RBP eCLIP5.14□□□□□ -1.59
NUP50-212ENST00000461194 COL7A1Q02388 2944 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 LINC00854A0A1B0GVQ3 168 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 C9orf170A2RU37 121 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 RBMY1BA6NDE4 496 aaKnown RBP5.13□□□□□ -1.59
NUP50-212ENST00000461194 RBMY1EA6NEQ0 496 aaKnown RBP5.13□□□□□ -1.59
NUP50-212ENST00000461194 FAM90A26D6RGX4 464 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 IFNA10P01566 189 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 IGKV1-17P01599 117 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 RBMY1DP0C7P1 496 aaKnown RBP5.13□□□□□ -1.59
NUP50-212ENST00000461194 IGLC1P0CG04 106 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 PSG1P11464 419 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 BMI1P35226 326 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 CNPY1Q3B7I2 92 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 OR1S2Q8NGQ3 325 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 OR1S1Q8NH92 325 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 RNF2Q99496 336 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 WFDC10AQ9H1F0 79 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 VSIRQ9H7M9 311 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 SRD5A3Q9H8P0 318 aa5.13□□□□□ -1.59
NUP50-212ENST00000461194 MAP6D1Q9H9H5 199 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms