RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 SCGB1D2O95969 90 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 IL4P05112 153 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 USF2Q15853 346 aaPredicted RBP13.24□□□□□ -0.29
PLOD3-209ENST00000460475 HAGHQ16775 308 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 OR51G1Q8NGK1 321 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 SRD5A3Q9H8P0 318 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 U3KQK5 164 aa13.24□□□□□ -0.29
PLOD3-209ENST00000460475 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
PLOD3-209ENST00000460475 C5orf51A6NDU8 294 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
PLOD3-209ENST00000460475 FAM25EA8MYX2 175 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 FABP1P07148 127 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
PLOD3-209ENST00000460475 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
PLOD3-209ENST00000460475 ZNF90Q03938 601 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 RNF125Q96EQ8 232 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 NARS2Q96I59 477 aaKnown RBP13.23□□□□□ -0.29
PLOD3-209ENST00000460475 C11orf1Q9H5F2 150 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
PLOD3-209ENST00000460475 IGHV3-66A0A0C4DH42 116 aa13.22□□□□□ -0.29
PLOD3-209ENST00000460475 P2RY1P47900 373 aa13.22□□□□□ -0.29
PLOD3-209ENST00000460475 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
PLOD3-209ENST00000460475 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
PLOD3-209ENST00000460475 GSG1LQ6UXU4 331 aa13.22□□□□□ -0.29
PLOD3-209ENST00000460475 ACOT7LQ6ZUV0 252 aa13.22□□□□□ -0.29
PLOD3-209ENST00000460475 CITED4Q96RK1 184 aa13.22□□□□□ -0.29
PLOD3-209ENST00000460475 FNDC10F2Z333 226 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 K7EPK0 472 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 BUB3O43684 328 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 DLK1P80370 383 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 OR8G2PQ6IF36 304 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 TMEM144Q7Z5S9 345 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 GLMPQ8WWB7 406 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 GRAMD2BQ96HH9 432 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 MS4A6AQ9H2W1 248 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 ZMAT4Q9H898 229 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 RABAC1Q9UI14 185 aa13.21□□□□□ -0.29
PLOD3-209ENST00000460475 CCNKO75909 580 aa13.2□□□□□ -0.3
PLOD3-209ENST00000460475 CFDP00746 253 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-209ENST00000460475 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
PLOD3-209ENST00000460475 IGKV3-7A0A075B6H7 116 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 HELTA6NFD8 242 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 NUP62P37198 522 aaPredicted RBP13.19□□□□□ -0.3
PLOD3-209ENST00000460475 EIF2B2P49770 351 aaKnown RBP13.19□□□□□ -0.3
PLOD3-209ENST00000460475 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 SPATA25Q9BR10 227 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 GGACTQ9BVM4 153 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 UBQLN2Q9UHD9 624 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
PLOD3-209ENST00000460475 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
PLOD3-209ENST00000460475 L7N2F9 121 aa13.18□□□□□ -0.3
PLOD3-209ENST00000460475 DEDDO75618 318 aa13.18□□□□□ -0.3
PLOD3-209ENST00000460475 TFPI2P48307 235 aa13.18□□□□□ -0.3
PLOD3-209ENST00000460475 AP2S1P53680 142 aaPredicted RBP13.18□□□□□ -0.3
PLOD3-209ENST00000460475 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
PLOD3-209ENST00000460475 VAMP2P63027 116 aa13.18□□□□□ -0.3
PLOD3-209ENST00000460475 AKR1C1Q04828 323 aa13.18□□□□□ -0.3
PLOD3-209ENST00000460475 NPVFQ9HCQ7 196 aa13.18□□□□□ -0.3
PLOD3-209ENST00000460475 LOC102724200A0A096LPH7 203 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-209ENST00000460475 K7EQG2 157 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-209ENST00000460475 PVALBP20472 110 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-209ENST00000460475 ARL16Q0P5N6 197 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 OR2F1Q13607 317 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 RAB32Q13637 225 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 STPG3Q8N7X2 389 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 DCANP1Q8TF63 244 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 WWC2-AS2Q96NR7 200 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 PBDC1Q9BVG4 233 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 GGTLC1Q9BX51 225 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
PLOD3-209ENST00000460475 PTTG1O95997 202 aa13.16□□□□□ -0.3
PLOD3-209ENST00000460475 LYZP61626 148 aa13.16□□□□□ -0.3
PLOD3-209ENST00000460475 C1orf194Q5T5A4 169 aa13.16□□□□□ -0.3
PLOD3-209ENST00000460475 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
PLOD3-209ENST00000460475 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
PLOD3-209ENST00000460475 NMES1Q9C002 83 aa13.16□□□□□ -0.3
PLOD3-209ENST00000460475 LYRM2Q9NU23 88 aaPredicted RBP13.16□□□□□ -0.3
PLOD3-209ENST00000460475 SMCO3A2RU48 225 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 GOSR2O14653 212 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 SIX6O95475 246 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 RRAS2P62070 204 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-209ENST00000460475 SELENOTP62341 195 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 CYCSP99999 105 aaKnown RBP13.15□□□□□ -0.3
PLOD3-209ENST00000460475 SIGLEC15Q6ZMC9 328 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 MGAT4CQ9UBM8 478 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 AGRNO00468 2067 aa13.15□□□□□ -0.3
PLOD3-209ENST00000460475 KIR2DL5BA0A0G2JN68 375 aa13.14□□□□□ -0.31
PLOD3-209ENST00000460475 KIR2DL5BA0A0G2JPC4 375 aa13.14□□□□□ -0.31
PLOD3-209ENST00000460475 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
PLOD3-209ENST00000460475 GATA2P23769 480 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms