RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PSG1P11464 419 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 CRYBB3P26998 211 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 BCAP31P51572 246 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 PAFAH1B2P68402 229 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 TCF24Q7RTU0 167 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 OR10P1Q8NGE3 313 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 TRGV9Q99603 122 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 MGAT4CQ9UBM8 478 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 PFDN2Q9UHV9 154 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 RABAC1Q9UI14 185 aa16.31■□□□□ 0.2
SSNA1-202ENST00000459860 IGHV3-66A0A0C4DH42 116 aa16.3■□□□□ 0.2
SSNA1-202ENST00000459860 OR11H12B2RN74 326 aa16.3■□□□□ 0.2
SSNA1-202ENST00000459860 APOHP02749 345 aaPredicted RBP16.3■□□□□ 0.2
SSNA1-202ENST00000459860 NHLRC4P0CG21 123 aaPredicted RBP16.3■□□□□ 0.2
SSNA1-202ENST00000459860 NUP62P37198 522 aaPredicted RBP16.3■□□□□ 0.2
SSNA1-202ENST00000459860 THAP8Q8NA92 274 aa16.3■□□□□ 0.2
SSNA1-202ENST00000459860 RNF125Q96EQ8 232 aa16.3■□□□□ 0.2
SSNA1-202ENST00000459860 WWC2-AS2Q96NR7 200 aa16.3■□□□□ 0.2
SSNA1-202ENST00000459860 IGKV3-7A0A075B6H7 116 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 IGKV1D-37A0A075B6S9 117 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 EIF2B2P49770 351 aaKnown RBP16.29■□□□□ 0.2
SSNA1-202ENST00000459860 CAV2P51636 162 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 RPL11P62913 178 aaKnown RBP16.29■□□□□ 0.2
SSNA1-202ENST00000459860 DLK1P80370 383 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 ZNF90Q03938 601 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 ASCL2Q99929 193 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 PBDC1Q9BVG4 233 aa16.29■□□□□ 0.2
SSNA1-202ENST00000459860 CFDP00746 253 aaPredicted RBP16.28■□□□□ 0.2
SSNA1-202ENST00000459860 P2RY1P47900 373 aa16.28■□□□□ 0.2
SSNA1-202ENST00000459860 RRAS2P62070 204 aaPredicted RBP16.28■□□□□ 0.2
SSNA1-202ENST00000459860 CYCSP99999 105 aaKnown RBP16.28■□□□□ 0.2
SSNA1-202ENST00000459860 RAB32Q13637 225 aa16.28■□□□□ 0.2
SSNA1-202ENST00000459860 USF2Q15853 346 aaPredicted RBP16.28■□□□□ 0.2
SSNA1-202ENST00000459860 C19orf73Q9NVV2 129 aa16.28■□□□□ 0.2
SSNA1-202ENST00000459860 PMS2P5A8MQ11 134 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 FNDC10F2Z333 226 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 DFFBO76075 338 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 SIX6O95475 246 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 TFPI2P48307 235 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 LYZP61626 148 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 OR2F1Q13607 317 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 TMEM144Q7Z5S9 345 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 DEFB125Q8N687 156 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 NMES1Q9C002 83 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 SRD5A3Q9H8P0 318 aa16.27■□□□□ 0.2
SSNA1-202ENST00000459860 IGKV1OR2-108A0A075B7D4 117 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 DNASE2O00115 360 aaPredicted RBP16.26■□□□□ 0.19
SSNA1-202ENST00000459860 CCNKO75909 580 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 RLN2P04090 185 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 FAM90A2PQ658T7 463 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 BPIFCQ8NFQ6 507 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 WFDC10AQ9H1F0 79 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 NPVFQ9HCQ7 196 aa16.26■□□□□ 0.19
SSNA1-202ENST00000459860 HELTA6NFD8 242 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 CMC4P56277 68 aaPredicted RBP16.25■□□□□ 0.19
SSNA1-202ENST00000459860 IL15RAQ13261 267 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 STX12Q86Y82 276 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 SBSPONQ8IVN8 264 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 GBGT1Q8N5D6 347 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 PPP1R14BQ96C90 147 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 GGACTQ9BVM4 153 aa16.25■□□□□ 0.19
SSNA1-202ENST00000459860 LILRB2Q8N423 598 aa16.24■□□□□ 0.19
SSNA1-202ENST00000459860 ZMAT4Q9H898 229 aa16.24■□□□□ 0.19
SSNA1-202ENST00000459860 LYRM2Q9NU23 88 aaPredicted RBP16.24■□□□□ 0.19
SSNA1-202ENST00000459860 UBQLN2Q9UHD9 624 aa16.24■□□□□ 0.19
SSNA1-202ENST00000459860 U3KQE9 123 aa16.24■□□□□ 0.19
SSNA1-202ENST00000459860 TRAV2A0A0B4J234 112 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 FAM24AA6NFZ4 105 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 S100A7P31151 101 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 AP2S1P53680 142 aaPredicted RBP16.23■□□□□ 0.19
SSNA1-202ENST00000459860 SLC38A11Q08AI6 406 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 LRRC37A5PQ49AS3 106 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 C16orf54Q6UWD8 224 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 WFDC3Q8IUB2 231 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 STXBP6Q8NFX7 210 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 FAM110AQ9BQ89 295 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 MS4A6AQ9H2W1 248 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 C11orf1Q9H5F2 150 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 ALG5Q9Y673 324 aa16.23■□□□□ 0.19
SSNA1-202ENST00000459860 DEDDO75618 318 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 SELENOTP62341 195 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 HBG1P69891 147 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 HBG2P69892 147 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 RGS21Q2M5E4 152 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 TEPPQ6URK8 271 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 CYP2G1PQ6ZSU1 146 aa16.22■□□□□ 0.19
SSNA1-202ENST00000459860 E5RGE8 158 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 BUB3O43684 328 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 CST7O76096 145 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 PET100P0DJ07 73 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 SULT1A1P50225 295 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 ODF3L2Q3SX64 289 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 GLMPQ8WWB7 406 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 FBXL17Q9UF56 701 aa16.21■□□□□ 0.19
SSNA1-202ENST00000459860 H2BFSP57053 126 aa16.2■□□□□ 0.18
SSNA1-202ENST00000459860 ARL16Q0P5N6 197 aa16.2■□□□□ 0.18
SSNA1-202ENST00000459860 SIGLEC15Q6ZMC9 328 aa16.2■□□□□ 0.18
SSNA1-202ENST00000459860 TMEM252Q8N6L7 170 aa16.2■□□□□ 0.18
SSNA1-202ENST00000459860 TMEM217Q8N7C4 229 aa16.2■□□□□ 0.18
SSNA1-202ENST00000459860 TMEM147Q9BVK8 224 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms