RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 S100A10P60903 97 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 SRSF4Q08170 494 aaKnown RBP8.2□□□□□ -1.1
USP39-210ENST00000459775 IL15RAQ13261 267 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 MMDQ15546 238 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 TMEM241Q24JQ0 296 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 C1QL4Q86Z23 238 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 OR5AC2Q9NZP5 309 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 LSM5Q9Y4Y9 91 aaKnown RBP8.2□□□□□ -1.1
USP39-210ENST00000459775 H3BUX3 64 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 MOSP00540 346 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 AMBPP02760 352 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 ERVK-16P61578 105 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 PEA15Q15121 130 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 ZNF664Q8N3J9 261 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 TCTEX1D1Q8N7M0 179 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 OR1S1Q8NH92 325 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 OSR1Q8TAX0 266 aaPredicted RBP8.2□□□□□ -1.1
USP39-210ENST00000459775 LSM10Q969L4 123 aaKnown RBP8.2□□□□□ -1.1
USP39-210ENST00000459775 ZDHHC16Q969W1 377 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 MEGF9Q9H1U4 602 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 COMMD9Q9P000 198 aa8.2□□□□□ -1.1
USP39-210ENST00000459775 FGF16O43320 207 aa8.19□□□□□ -1.1
USP39-210ENST00000459775 PITX3O75364 302 aa8.19□□□□□ -1.1
USP39-210ENST00000459775 HRASP01112 189 aa8.19□□□□□ -1.1
USP39-210ENST00000459775 GIPP09681 153 aaPredicted RBP8.19□□□□□ -1.1
USP39-210ENST00000459775 PLP1P60201 277 aa8.19□□□□□ -1.1
USP39-210ENST00000459775 CLINT1Q14677 625 aa8.19□□□□□ -1.1
USP39-210ENST00000459775 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
USP39-210ENST00000459775 RNF126Q9BV68 326 aa8.19□□□□□ -1.1
USP39-210ENST00000459775 ACTR3CQ9C0K3 210 aaPredicted RBP8.19□□□□□ -1.1
USP39-210ENST00000459775 A0A1B0GW64 132 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 OOSP1A8MZH6 123 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 G3V4G9 280 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 UPK2O00526 184 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 C8orf88P0DMB2 117 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 IAPPP10997 89 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 SRP14P37108 136 aaKnown RBP8.18□□□□□ -1.1
USP39-210ENST00000459775 GNB1P62873 340 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 Q8N6K4 173 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
USP39-210ENST00000459775 V9GYY9 64 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 PLXNB1O43157 2135 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 A0A1B0GU03 582 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 LINC01548A6NM66 108 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 H3BP45 60 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 K7EPK0 472 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 SSSCA1O60232 199 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 KBTBD11O94819 623 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 MPC2O95563 127 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 FAM106CPP0CH98 169 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 C19orf35Q6ZS72 473 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 NIT1Q86X76 327 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 FAM71E2Q8N5Q1 922 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 OR2T10Q8NGZ9 312 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 LYPD6BQ8NI32 183 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 THAP6Q8TBB0 222 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 FAM103A1Q9BTL3 118 aaKnown RBP8.18□□□□□ -1.1
USP39-210ENST00000459775 NMES1Q9C002 83 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 AURKAIP1Q9NWT8 199 aaPredicted RBP8.18□□□□□ -1.1
USP39-210ENST00000459775 SIGLEC9Q9Y336 463 aa8.18□□□□□ -1.1
USP39-210ENST00000459775 TNCP24821 2201 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 FXYD6-FXYD2A0A087WZ82 144 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 DUXBA0A1W2PPF3 345 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 E5RGE8 158 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 CHST1O43916 411 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 OR7C2O60412 319 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 NMBP08949 121 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 NKX2-1P43699 371 aaPredicted RBP8.17□□□□□ -1.1
USP39-210ENST00000459775 JOSD1Q15040 202 aaPredicted RBP8.17□□□□□ -1.1
USP39-210ENST00000459775 PLGLAQ15195 96 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 LRRC75BQ2VPJ9 315 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 Q6ZS46 218 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 SIGLECL1Q8N7X8 197 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 P2RX4Q99571 388 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 TEX50A0A1B0GTY4 177 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 HAX1O00165 279 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 RRHO14718 337 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 HOXA3O43365 443 aaPredicted RBP8.17□□□□□ -1.1
USP39-210ENST00000459775 AMY1AP04745 511 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 RHOGP84095 191 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 ID3Q02535 119 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 EBI3Q14213 229 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 VMA21Q3ZAQ7 101 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 C10orf91Q5T1B1 145 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 RBKSQ9H477 322 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 OR51B2Q9Y5P1 312 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 RFNGQ9Y644 331 aa8.17□□□□□ -1.1
USP39-210ENST00000459775 HIVEP2P31629 2446 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 MSGN1A6NI15 193 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 C15orf61A6NNL5 157 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 CA2P00918 260 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 REG1AP05451 166 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 IER3P46695 156 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 RPL8P62917 257 aaKnown RBP8.16□□□□□ -1.1
USP39-210ENST00000459775 PRSS8Q16651 343 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 TEX38Q6PEX7 206 aa8.16□□□□□ -1.1
USP39-210ENST00000459775 PPP1R27Q86WC6 154 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms