RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 USF2Q15853 346 aaPredicted RBP8.48□□□□□ -1.05
LMCD1-206ENST00000456506 TRIM16LQ309B1 348 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 RNASE12Q5GAN4 147 aaKnown RBP8.48□□□□□ -1.05
LMCD1-206ENST00000456506 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 Q6ZRM9 215 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 ZNF575Q86XF7 245 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 ARRDC1Q8N5I2 433 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 SLC35G3Q8N808 338 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 TMEM170AQ8WVE7 144 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 NEU1Q99519 415 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 NDUFAF3Q9BU61 184 aa8.48□□□□□ -1.05
LMCD1-206ENST00000456506 HELTA6NFD8 242 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 OPRK1P41145 380 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 TSPAN5P62079 268 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 DHRS2Q13268 280 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 RNASE10Q5GAN6 216 aaKnown RBP8.47□□□□□ -1.05
LMCD1-206ENST00000456506 GDF5OSQ5U4N7 250 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 PRSS54Q6PEW0 395 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 ZNF486Q96H40 463 aaPredicted RBP8.47□□□□□ -1.05
LMCD1-206ENST00000456506 SLC25A21Q9BQT8 299 aaPredicted RBP8.47□□□□□ -1.05
LMCD1-206ENST00000456506 SEPSECSQ9HD40 501 aaKnown RBP8.47□□□□□ -1.05
LMCD1-206ENST00000456506 XCL2Q9UBD3 114 aa8.47□□□□□ -1.05
LMCD1-206ENST00000456506 LINC00854A0A1B0GVQ3 168 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 DISC1C4P0D8 188 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 M0QYG6 137 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 NDUFB6O95139 128 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 NXPH3O95157 252 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 IFNA17P01571 189 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 TCRBP04435 133 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 UCP1P25874 307 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 S100GP29377 79 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 OR4D10Q8NGI6 311 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 ENKURQ8TC29 256 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 TMEM230Q96A57 120 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 PRRT1Q99946 306 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 C1QTNF4Q9BXJ3 329 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
LMCD1-206ENST00000456506 TRAV30A0A087WSZ9 112 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 BUB3O43684 328 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 HNRNPCP07910 306 aaKnown RBP eCLIP8.45□□□□□ -1.06
LMCD1-206ENST00000456506 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.06
LMCD1-206ENST00000456506 PIGPP57054 158 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 DEFB1P60022 68 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 YPEL3P61236 119 aaPredicted RBP8.45□□□□□ -1.06
LMCD1-206ENST00000456506 DHODHQ02127 395 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 OR51S1Q8NGJ8 323 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 OR1S2Q8NGQ3 325 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 TERB2Q8NHR7 220 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 LHFPL5Q8TAF8 219 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 NRN1Q9NPD7 142 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 DKK2Q9UBU2 259 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 SCP2D1Q9UJQ7 156 aa8.45□□□□□ -1.06
LMCD1-206ENST00000456506 IGLV2-18A0A075B6J9 118 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 C3orf85A0A1B0GTC6 90 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 HOXA1P49639 335 aaPredicted RBP8.44□□□□□ -1.06
LMCD1-206ENST00000456506 CCR6P51684 374 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 RND2P52198 227 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 AKR1C2P52895 323 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 AP2S1P53680 142 aaPredicted RBP8.44□□□□□ -1.06
LMCD1-206ENST00000456506 SURF2Q15527 256 aaPredicted RBP8.44□□□□□ -1.06
LMCD1-206ENST00000456506 SP6Q3SY56 376 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 C2orf83Q53S99 150 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 ZNF709Q8N972 641 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 OR13C8Q8NGS7 320 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 OR52E5Q8NH55 327 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
LMCD1-206ENST00000456506 SMIM9A6NGZ8 99 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 SOCS3O14543 225 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 CDS2O95674 445 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 IL5P05113 134 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 SPART-AS1P0CW21 52 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 NPY1RP25929 384 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 HTR2BP41595 481 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 SPCS3P61009 180 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 RNF212Q495C1 297 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 CHAC2Q8WUX2 184 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 NARS2Q96I59 477 aaKnown RBP8.43□□□□□ -1.06
LMCD1-206ENST00000456506 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 GPR132Q9UNW8 380 aa8.43□□□□□ -1.06
LMCD1-206ENST00000456506 A0A1B0GVG6 124 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 C7orf66A4D0T2 115 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 INMT-MINDY4F8WBC2 141 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 PRAF2O60831 178 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 TOMM40O96008 361 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 IFNA10P01566 189 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 IL4P05112 153 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 PGAM2P15259 253 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 OR10J1P30954 320 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 NKX2-1P43699 371 aaPredicted RBP8.42□□□□□ -1.06
LMCD1-206ENST00000456506 EIF2B2P49770 351 aaKnown RBP8.42□□□□□ -1.06
LMCD1-206ENST00000456506 NUTF2P61970 127 aaKnown RBP8.42□□□□□ -1.06
LMCD1-206ENST00000456506 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
LMCD1-206ENST00000456506 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 FAAP20Q6NZ36 180 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 SIGLEC15Q6ZMC9 328 aa8.42□□□□□ -1.06
LMCD1-206ENST00000456506 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms