RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CSMD3Q7Z407 3707 aa15.59■□□□□ 0.09
HMGB3-205ENST00000455596 DHRS2Q13268 280 aa15.59■□□□□ 0.09
HMGB3-205ENST00000455596 RNF125Q96EQ8 232 aa15.59■□□□□ 0.09
HMGB3-205ENST00000455596 MAGT1Q9H0U3 335 aa15.59■□□□□ 0.09
HMGB3-205ENST00000455596 FLVCR2Q9UPI3 526 aa15.59■□□□□ 0.09
HMGB3-205ENST00000455596 WRBO00258 174 aa15.58■□□□□ 0.08
HMGB3-205ENST00000455596 BUB3O43684 328 aa15.58■□□□□ 0.08
HMGB3-205ENST00000455596 FABP1P07148 127 aa15.58■□□□□ 0.08
HMGB3-205ENST00000455596 ZNF688P0C7X2 276 aa15.58■□□□□ 0.08
HMGB3-205ENST00000455596 IL7P13232 177 aa15.58■□□□□ 0.08
HMGB3-205ENST00000455596 COQ8AQ8NI60 647 aa15.58■□□□□ 0.08
HMGB3-205ENST00000455596 IGKV1D-37A0A075B6S9 117 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 JTBO76095 146 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 CA1P00915 261 aaPredicted RBP15.57■□□□□ 0.08
HMGB3-205ENST00000455596 OR4E1P0C645 316 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 BTCP35070 178 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 NUP62P37198 522 aaPredicted RBP15.57■□□□□ 0.08
HMGB3-205ENST00000455596 TMEM217Q8N7C4 229 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 RARRES2Q99969 163 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 PBDC1Q9BVG4 233 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 PFDN2Q9UHV9 154 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 TENM2Q9NT68 2774 aa15.57■□□□□ 0.08
HMGB3-205ENST00000455596 ADAP1O75689 374 aa15.56■□□□□ 0.08
HMGB3-205ENST00000455596 ATF4P18848 351 aaPredicted RBP15.56■□□□□ 0.08
HMGB3-205ENST00000455596 EWSR1Q01844 656 aaKnown RBP eCLIP15.56■□□□□ 0.08
HMGB3-205ENST00000455596 ZNF90Q03938 601 aa15.56■□□□□ 0.08
HMGB3-205ENST00000455596 OR8G2PQ6IF36 304 aa15.56■□□□□ 0.08
HMGB3-205ENST00000455596 SIGLEC15Q6ZMC9 328 aa15.56■□□□□ 0.08
HMGB3-205ENST00000455596 CXorf65A6NEN9 183 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 IFNA21P01568 189 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 PMS2P11Q13670 270 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 CNPY1Q3B7I2 92 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 C4orf46Q504U0 113 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 SPANXN5Q5MJ07 72 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 TRGV9Q99603 122 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 NRN1Q9NPD7 142 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 RYR3Q15413 4870 aa15.55■□□□□ 0.08
HMGB3-205ENST00000455596 SNRPGP15A8MWD9 76 aa15.54■□□□□ 0.08
HMGB3-205ENST00000455596 ANXA7P20073 488 aaKnown RBP15.54■□□□□ 0.08
HMGB3-205ENST00000455596 LYZP61626 148 aa15.54■□□□□ 0.08
HMGB3-205ENST00000455596 ID3Q02535 119 aa15.54■□□□□ 0.08
HMGB3-205ENST00000455596 TRPT1Q86TN4 253 aaKnown RBP15.54■□□□□ 0.08
HMGB3-205ENST00000455596 OR11H2Q8NH07 326 aa15.54■□□□□ 0.08
HMGB3-205ENST00000455596 STRAPQ9Y3F4 350 aaKnown RBP15.54■□□□□ 0.08
HMGB3-205ENST00000455596 KNCNA6PVL3 124 aa15.53■□□□□ 0.08
HMGB3-205ENST00000455596 PRSS46E5RG02 174 aa15.53■□□□□ 0.08
HMGB3-205ENST00000455596 SPP1P10451 314 aa15.53■□□□□ 0.08
HMGB3-205ENST00000455596 SNRPD3P62318 126 aaKnown RBP15.53■□□□□ 0.08
HMGB3-205ENST00000455596 PSMG4Q5JS54 123 aa15.53■□□□□ 0.08
HMGB3-205ENST00000455596 MORN3Q6PF18 240 aaPredicted RBP15.53■□□□□ 0.08
HMGB3-205ENST00000455596 THAP8Q8NA92 274 aa15.53■□□□□ 0.08
HMGB3-205ENST00000455596 SEPSECSQ9HD40 501 aaKnown RBP15.53■□□□□ 0.08
HMGB3-205ENST00000455596 STARD9Q9P2P6 4700 aa15.53■□□□□ 0.08
HMGB3-205ENST00000455596 IGKV1OR2-108A0A075B7D4 117 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 NUPR2A6NF83 97 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 H3BP45 60 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 NKX2-1P43699 371 aaPredicted RBP15.52■□□□□ 0.08
HMGB3-205ENST00000455596 OR2F1Q13607 317 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 TMEM41BQ5BJD5 291 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 ACTL10Q5JWF8 245 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 OR4D5Q8NGN0 318 aa15.52■□□□□ 0.08
HMGB3-205ENST00000455596 POLR2GP62487 172 aaKnown RBP eCLIP15.51■□□□□ 0.07
HMGB3-205ENST00000455596 RAB40CQ96S21 281 aa15.51■□□□□ 0.07
HMGB3-205ENST00000455596 PSENENQ9NZ42 101 aa15.51■□□□□ 0.07
HMGB3-205ENST00000455596 FBXL17Q9UF56 701 aa15.51■□□□□ 0.07
HMGB3-205ENST00000455596 PLA2G10O15496 165 aa15.5■□□□□ 0.07
HMGB3-205ENST00000455596 LYRM1O43325 122 aa15.5■□□□□ 0.07
HMGB3-205ENST00000455596 CFDP00746 253 aaPredicted RBP15.5■□□□□ 0.07
HMGB3-205ENST00000455596 C1orf194Q5T5A4 169 aa15.5■□□□□ 0.07
HMGB3-205ENST00000455596 PPP1R14BQ96C90 147 aa15.5■□□□□ 0.07
HMGB3-205ENST00000455596 C20orf85Q9H1P6 137 aa15.5■□□□□ 0.07
HMGB3-205ENST00000455596 C11orf68Q9H3H3 251 aaKnown RBP15.5■□□□□ 0.07
HMGB3-205ENST00000455596 AKR1C1Q04828 323 aa15.49■□□□□ 0.07
HMGB3-205ENST00000455596 SSSCA1O60232 199 aa15.48■□□□□ 0.07
HMGB3-205ENST00000455596 GIG44P09565 113 aaPredicted RBP15.48■□□□□ 0.07
HMGB3-205ENST00000455596 C4BPBP20851 252 aa15.48■□□□□ 0.07
HMGB3-205ENST00000455596 IAH1Q2TAA2 248 aaPredicted RBP15.48■□□□□ 0.07
HMGB3-205ENST00000455596 CEMP1Q6PRD7 247 aaPredicted RBP15.48■□□□□ 0.07
HMGB3-205ENST00000455596 ACOT7LQ6ZUV0 252 aa15.48■□□□□ 0.07
HMGB3-205ENST00000455596 MITD1Q8WV92 249 aa15.48■□□□□ 0.07
HMGB3-205ENST00000455596 SMIM8Q96KF7 97 aa15.48■□□□□ 0.07
HMGB3-205ENST00000455596 DYNC2H1Q8NCM8 4307 aaKnown RBP15.47■□□□□ 0.07
HMGB3-205ENST00000455596 SCGB1D2O95969 90 aa15.47■□□□□ 0.07
HMGB3-205ENST00000455596 BPIFCQ8NFQ6 507 aa15.47■□□□□ 0.07
HMGB3-205ENST00000455596 TCRBP04435 133 aa15.46■□□□□ 0.07
HMGB3-205ENST00000455596 TMEM144Q7Z5S9 345 aa15.46■□□□□ 0.07
HMGB3-205ENST00000455596 OR8I2Q8N0Y5 310 aa15.46■□□□□ 0.07
HMGB3-205ENST00000455596 CCDC32Q9BV29 185 aa15.46■□□□□ 0.07
HMGB3-205ENST00000455596 SLC45A2Q9UMX9 530 aa15.46■□□□□ 0.07
HMGB3-205ENST00000455596 KLK5Q9Y337 293 aaPredicted RBP15.46■□□□□ 0.07
HMGB3-205ENST00000455596 SMCO3A2RU48 225 aa15.45■□□□□ 0.06
HMGB3-205ENST00000455596 PMS2P5A8MQ11 134 aa15.45■□□□□ 0.06
HMGB3-205ENST00000455596 ID1P41134 155 aa15.45■□□□□ 0.06
HMGB3-205ENST00000455596 NUTF2P61970 127 aaKnown RBP15.45■□□□□ 0.06
HMGB3-205ENST00000455596 ZBTB8BQ8NAP8 495 aaPredicted RBP15.45■□□□□ 0.06
HMGB3-205ENST00000455596 C11orf45Q8TAV5 145 aa15.45■□□□□ 0.06
HMGB3-205ENST00000455596 WDR12Q9GZL7 423 aaKnown RBP15.45■□□□□ 0.06
HMGB3-205ENST00000455596 MFFQ9GZY8 342 aa15.45■□□□□ 0.06
HMGB3-205ENST00000455596 GSKIPQ9P0R6 139 aa15.45■□□□□ 0.06
HMGB3-205ENST00000455596 LYSTQ99698 3801 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms