RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RPL27AP46776 148 aaKnown RBP10.16□□□□□ -0.78
UBE3B-204ENST00000449510 GUSBP1Q15486 140 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 LCNL1Q6ZST4 164 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 VSTM2AQ8TAG5 236 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 IGHV2OR16-5A0A0B4J2B6 119 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 SRSF7Q16629 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBE3B-204ENST00000449510 ONECUT1Q9UBC0 465 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 EPDR1Q9UM22 224 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 SAP30O75446 220 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 NCR2O95944 276 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 OR2K2Q8NGT1 345 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 RAB1CQ92928 201 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 IDI2-AS1Q9NZ38 188 aa10.16□□□□□ -0.78
UBE3B-204ENST00000449510 C9JCJ5 164 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 M0R296 226 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 Q9H3A6 140 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 RALYQ9UKM9 306 aaKnown RBP10.15□□□□□ -0.78
UBE3B-204ENST00000449510 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 TNFRSF1AP19438 455 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 CD69Q07108 199 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 TMEM97Q5BJF2 176 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 MORN5Q5VZ52 161 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 STXBP6Q8NFX7 210 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 ZNF414Q96IQ9 312 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 CDX2Q99626 313 aaPredicted RBP10.15□□□□□ -0.78
UBE3B-204ENST00000449510 NHP2Q9NX24 153 aaKnown RBP10.15□□□□□ -0.78
UBE3B-204ENST00000449510 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.78
UBE3B-204ENST00000449510 IQCF6A8MYZ5 107 aa10.15□□□□□ -0.79
UBE3B-204ENST00000449510 SPRR3Q9UBC9 169 aa10.15□□□□□ -0.79
UBE3B-204ENST00000449510 KBTBD11-OT1A0A1B0GTJ5 212 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 TMEM189A5PLL7 270 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 H7C2G1 150 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 SFXN3Q9BWM7 321 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 TRBV6-6A0A0A6YYG2 114 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 FAM231BA6NCW3 169 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 SMKR1H3BMG3 65 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 S100A4P26447 101 aaKnown RBP10.14□□□□□ -0.79
UBE3B-204ENST00000449510 FAM27E3Q08E93 113 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
UBE3B-204ENST00000449510 Q6ZT83 130 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 C5orf30Q96GV9 206 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 ZNF714Q96N38 554 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 IGHV3-66A0A0C4DH42 116 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 UPK2O00526 184 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 SRSF9Q13242 221 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBE3B-204ENST00000449510 TMEM108Q6UXF1 575 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 ZADH2Q8N4Q0 377 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 ZPBPQ9BS86 351 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
UBE3B-204ENST00000449510 IGKV1D-17A0A075B6S4 117 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 K7EMI3 77 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 RNFT1Q5M7Z0 435 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 C9orf106Q8NAJ2 232 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 SMIM12Q96EX1 92 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 FBXL15Q9H469 300 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 TRAV17A0A0B4J275 112 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 IL4P05112 153 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 C2orf83Q53S99 150 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 PRELID3AQ96N28 172 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 SPOCK3Q9BQ16 436 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 NDFIP1Q9BT67 221 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 SORL1Q92673 2214 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 C2orf16Q68DN1 1984 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 IGKV3D-15A0A087WSY6 115 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 M0R3E3 92 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 YPEL1O60688 119 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 EVI2AP22794 236 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 NRN1LQ496H8 165 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 GCSAMQ8N6F7 178 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 YPEL2Q96QA6 119 aa10.13□□□□□ -0.79
UBE3B-204ENST00000449510 MMP23AO75900 390 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
UBE3B-204ENST00000449510 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
UBE3B-204ENST00000449510 UTF1Q5T230 341 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 PNKDQ8N490 385 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 FDCSPQ8NFU4 85 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 OR4C13Q8NGP0 309 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 ZNF502Q8TBZ5 544 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 MRPS16Q9Y3D3 137 aaKnown RBP10.12□□□□□ -0.79
UBE3B-204ENST00000449510 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 PMS2P5A8MQ11 134 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
UBE3B-204ENST00000449510 TIMM23BQ5SRD1 257 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 FAM169BQ8N8A8 192 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 C9orf172C9J069 976 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 C1orf210Q8IVY1 113 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 OR1N2Q8NGR9 330 aa10.12□□□□□ -0.79
UBE3B-204ENST00000449510 CIDEAO60543 219 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 CRYABP02511 175 aaKnown RBP10.11□□□□□ -0.79
UBE3B-204ENST00000449510 KLF17Q5JT82 389 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-204ENST00000449510 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 ST20Q9HBF5 79 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 ZNF71Q9NQZ8 489 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-204ENST00000449510 NDUFB8O95169 186 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 KIR2DL2P43627 348 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms