RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SPANXB1Q9NS25 103 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 TCF19Q9Y242 345 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 HSPE1P61604 102 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 NUP35Q8NFH5 326 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 ZNF355PQ9NSJ1 428 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 PSG8Q9UQ74 426 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 SSMEM1Q8WWF3 244 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 HSPB8Q9UJY1 196 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 WFDC2Q14508 124 aa10.96□□□□□ -0.65
SYNGAP1-204ENST00000449372 GCSAMQ8N6F7 178 aa10.96□□□□□ -0.65
SYNGAP1-204ENST00000449372 NHLRC2Q8NBF2 726 aa10.96□□□□□ -0.65
SYNGAP1-204ENST00000449372 VGLL1Q99990 258 aa10.96□□□□□ -0.65
SYNGAP1-204ENST00000449372 OR5AL1P0C617 328 aa10.96□□□□□ -0.65
SYNGAP1-204ENST00000449372 CCL11P51671 97 aa10.96□□□□□ -0.65
SYNGAP1-204ENST00000449372 EDDM3AQ14507 147 aa10.96□□□□□ -0.66
SYNGAP1-204ENST00000449372 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.66
SYNGAP1-204ENST00000449372 MGST2Q99735 147 aa10.96□□□□□ -0.66
SYNGAP1-204ENST00000449372 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.66
SYNGAP1-204ENST00000449372 AKAP13Q12802 2813 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 BOD1L1Q8NFC6 3051 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 IGLV2-8P01709 118 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 DUTP33316 252 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 EFNB3Q15768 340 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 RALYQ9UKM9 306 aaKnown RBP10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 A1L4Q6 167 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 C1orf162Q8NEQ5 155 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 ZNF418Q8TF45 676 aaPredicted RBP10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 FGF6P10767 208 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 PSG5Q15238 335 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 TMEM140Q9NV12 185 aa10.95□□□□□ -0.66
SYNGAP1-204ENST00000449372 KBTBD11-OT1A0A1B0GTJ5 212 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 IGHV1-2P23083 117 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 SH2D6Q7Z4S9 175 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 RNF183Q96D59 192 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 DCHS1Q96JQ0 3298 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 SMIM13P0DJ93 91 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 CD24P25063 80 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 PRDX2P32119 198 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 NBL1P41271 181 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 ETDBQ3ZM63 59 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 CACNA1DQ01668 2161 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 OR9G9P0C7N8 305 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 OR1L4Q8NGR5 311 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 RFESDQ8TAC1 157 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 KLF14Q8TD94 323 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 DUSP13Q9UII6 198 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 DOCK7Q96N67 2140 aa10.94□□□□□ -0.66
SYNGAP1-204ENST00000449372 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 F8W1H4 67 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 IGHV3-7P01780 117 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 TEX45Q8NA69 505 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 GRAMD2BQ96HH9 432 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 TCTAP57738 103 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 IGHV3-43A0A0B4J1X8 118 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 PSPNO60542 156 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 IGHV3-43DP0DP04 118 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 ERHP84090 104 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 FAM110AQ9BQ89 295 aa10.93□□□□□ -0.66
SYNGAP1-204ENST00000449372 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 SPINK8P0C7L1 97 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 KIR2DL2P43627 348 aaPredicted RBP10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 FOXF2Q12947 444 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 IDI2-AS1Q9NZ38 188 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 PRRC2CQ9Y520 2896 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 CACNA1GO43497 2377 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 C15orf61A6NNL5 157 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 SIVA1O15304 175 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 ACTL6BO94805 426 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 VDAC2P45880 294 aaPredicted RBP10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 ZNF138P52744 262 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 FAM214BQ7L5A3 538 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 DKK4Q9UBT3 224 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 FOXA2Q9Y261 457 aaPredicted RBP10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 TRAV17A0A0B4J275 112 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 DEFB108AA8MXU0 73 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 GFRA3O60609 400 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 OR9G4Q8NGQ1 327 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 OR13A1Q8NGR1 328 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 ARPC1AQ92747 370 aa10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 SNRNP40Q96DI7 357 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-204ENST00000449372 FAM87AP0C7U9 286 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 C8orf88P0DMB2 117 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 MPV17P39210 176 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 IGFL3Q6UXB1 125 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 Q6ZR03 302 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 Q6ZT83 130 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 OR4X2Q8NGF9 303 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 COQ2Q96H96 371 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
SYNGAP1-204ENST00000449372 B5MCH6 92 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms