RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RORCP51449 518 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 FAM3BP58499 235 aaPredicted RBP12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 PSG9Q00887 426 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 C2orf83Q53S99 150 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 EBLN2Q6P2I7 272 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 ZFAND1Q8TCF1 268 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 WDR12Q9GZL7 423 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 SCRT2Q9NQ03 307 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 PFDN2Q9UHV9 154 aa12.74□□□□□ -0.37
CHCHD3-203ENST00000448878 NBDYA0A0U1RRE5 68 aa12.73□□□□□ -0.37
CHCHD3-203ENST00000448878 NUDT3O95989 172 aa12.73□□□□□ -0.37
CHCHD3-203ENST00000448878 C1orf158Q8N1D5 194 aa12.73□□□□□ -0.37
CHCHD3-203ENST00000448878 ZNF709Q8N972 641 aa12.73□□□□□ -0.37
CHCHD3-203ENST00000448878 HSPG2P98160 4391 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 F6UB75 175 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 UCP1P25874 307 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 NUP62P37198 522 aaPredicted RBP12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 SCGB2B2Q4G0G5 96 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 FAM78BQ5VT40 261 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 Q8N1X5 172 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 PPP1R14BQ96C90 147 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 RNF125Q96EQ8 232 aa12.72□□□□□ -0.37
CHCHD3-203ENST00000448878 APOA1P02647 267 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 CD3DP04234 171 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 PSMB3P49720 205 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 LHFPL1Q86WI0 220 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 FAM219AQ8IW50 185 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 OR52E5Q8NH55 327 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 CACNG5Q9UF02 275 aa12.71□□□□□ -0.37
CHCHD3-203ENST00000448878 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 FAM25AB3EWG3 89 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 FAM25CB3EWG5 89 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 FAM25GB3EWG6 89 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 OR5AC1P0C628 307 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 DEFB130BP0DP73 79 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 DEFB130AP0DP74 79 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 SPATA31B1PQ5VZV4 182 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 NOXA1Q86UR1 476 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 ARRDC1Q8N5I2 433 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 OR13C8Q8NGS7 320 aa12.7□□□□□ -0.38
CHCHD3-203ENST00000448878 ZFP92A6NM28 416 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 F5H768 121 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 HPGDSO60760 199 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 ELK1P19419 428 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 LYZP61626 148 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 ZNF79Q15937 498 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 SPATA12Q7Z6I5 190 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 MARCH1Q8TCQ1 289 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 GPR146Q96CH1 333 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
CHCHD3-203ENST00000448878 ZNF705GA8MUZ8 300 aaPredicted RBP12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 B3GALNT1O75752 331 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 PRM2P04554 102 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 CCL18P55774 89 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 KLF9Q13886 244 aaPredicted RBP12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 MEF2DQ14814 521 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 TERB2Q8NHR7 220 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 TMEM170AQ8WVE7 144 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 C16orf92Q96LL3 132 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 TMEM222Q9H0R3 208 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
CHCHD3-203ENST00000448878 A0A0J9YX75 114 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 CDS2O95674 445 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 ZNF90Q03938 601 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 CLINT1Q14677 625 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 TMEM268Q5VZI3 342 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 OR8G2PQ6IF36 304 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 SELENOHQ8IZQ5 122 aaKnown RBP12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 OR8I2Q8N0Y5 310 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 OR4D10Q8NGI6 311 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 LHFPL5Q8TAF8 219 aa12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 C14orf166Q9Y224 244 aaKnown RBP12.67□□□□□ -0.38
CHCHD3-203ENST00000448878 ISLRO14498 428 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 PAX9P55771 341 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 OR52I2Q8NH67 350 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 IGF2BP2-AS1Q96M15 143 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 ABHD1Q96SE0 405 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 DOK5Q9P104 306 aa12.66□□□□□ -0.38
CHCHD3-203ENST00000448878 LYRM9A8MSI8 78 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 SOCS3O14543 225 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 RAB3DO95716 219 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 OR2F1Q13607 317 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 FCN2Q15485 313 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 AARDQ4LEZ3 155 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 C1orf194Q5T5A4 169 aa12.65□□□□□ -0.38
CHCHD3-203ENST00000448878 SNRPGP15A8MWD9 76 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 GABARAPH6UMI1 98 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 GABARAPO95166 117 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 FABP1P07148 127 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 ALDH3B2P48448 385 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 SPINK13Q1W4C9 94 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
CHCHD3-203ENST00000448878 YIPF6Q96EC8 236 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms